PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy003413

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

MYB_related

Protein Properties

Length: 420aa MW: 46014.3 Da PI: 8.3727

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S58472507	PU_unref	Unigene	View CDS
PUT-171a-Arachis_hypogaea-20833	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	41.1	4.2e-13	153	197	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ ++ + ++lG+g+W+ Iar + Rt+ q+ s+ qky Ahy003413 153 PWTEEEHRMFLLGLQKLGKGDWRGIARNYVTSRTPTQVASHAQKY 197 8*******************************************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	19.369	146	202	IPR017930	Myb domain
SuperFamily	SSF46689	4.16E-17	148	203	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	5.5E-19	149	201	IPR006447	Myb domain, plants
SMART	SM00717	1.1E-10	150	200	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	3.7E-11	152	196	IPR009057	Homeodomain-like
Pfam	PF00249	1.5E-10	153	197	IPR001005	SANT/Myb domain
CDD	cd00167	2.57E-9	153	198	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence Send to blast
XSFTPISASR GRKNKNPFLN RVNSFGSQLT RFQNPPLIAT VSDPFCGVGR KHDATVLALQ 60 QQRPQFEECP NRRVKLFGVR LTDGSIRKSA SMGNLTHYAA SGSSSGSHHH ASNNPGSPGG 120 GDTPDHAAAE GYASEDFVPG SSSTSRERKR GVPWTEEEHR MFLLGLQKLG KGDWRGIARN 180 YVTSRTPTQV ASHAQKYFIR QSNVSRRKRR SSLFDIVADE SADTPMVQQD QLQVETEGNN 240 PLPPVPPALD EECESMDSAN SNDRELALLK SDNSRSPFPV LYPTFYPPVF QLPIPCWSGY 300 DPEPTKKKEA HEVLKPTAVH SKSPINVDEL VGMSKLSLGD SIGDSAPSSL SLKLLEGPSR 360 QSAFHATPAC DSSNMNGSAI HAYKGPFWQV GVCPVAISMN VGIINLAMWS SHILWLWEYP

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence Send to blast

XSFTPISASR GRKNKNPFLN RVNSFGSQLT RFQNPPLIAT VSDPFCGVGR KHDATVLALQ  60
QQRPQFEECP NRRVKLFGVR LTDGSIRKSA SMGNLTHYAA SGSSSGSHHH ASNNPGSPGG  120
GDTPDHAAAE GYASEDFVPG SSSTSRERKR GVPWTEEEHR MFLLGLQKLG KGDWRGIARN  180
YVTSRTPTQV ASHAQKYFIR QSNVSRRKRR SSLFDIVADE SADTPMVQQD QLQVETEGNN  240
PLPPVPPALD EECESMDSAN SNDRELALLK SDNSRSPFPV LYPTFYPPVF QLPIPCWSGY  300
DPEPTKKKEA HEVLKPTAVH SKSPINVDEL VGMSKLSLGD SIGDSAPSSL SLKLLEGPSR  360
QSAFHATPAC DSSNMNGSAI HAYKGPFWQV GVCPVAISMN VGIINLAMWS SHILWLWEYP

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional repressor (PubMed:23888064, PubMed:24806884). Direct regulator of the transcription of peroxidase (Prxs) and reactive oxygen species (ROS)-related genes via the recognition of 5'-ATCACA-3' motif (PubMed:24806884). Binds to 5'-TATCCA-3' motif (TA box) and represses the activity of corresponding promoters (e.g. sugar response genes) (PubMed:25920996). Regulates hypocotyl elongation in response to darkness by enhancing auxin accumulation in a phytochrome-interacting factor (PIF) proteins-dependent manner. Promotes lateral roots formation (PubMed:23888064). Promotes cell expansion during leaves development via the modulation of cell wall-located Prxs (PubMed:24806884). Plays a critical role in developmentally regulated and dark-induced onset of leaf senescence by repressing the transcription of several genes involved in chloroplast function and responses to light and auxin. Promotes responses to auxin, abscisic acid (ABA), and ethylene (PubMed:25920996). {ECO:0000269\|PubMed:23888064, ECO:0000269\|PubMed:24806884, ECO:0000269\|PubMed:25920996}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Slightly induced by CdCl(2) (PubMed:16463103). Accumulates in the dark (PubMed:23888064, PubMed:25920996). Diurnal expression pattern with maximal levels in the morning (at protein level). Specifically induced during leaf expansion (PubMed:24806884). Expressed in old and dark-treated leaves (PubMed:25920996). {ECO:0000269\|PubMed:16463103, ECO:0000269\|PubMed:23888064, ECO:0000269\|PubMed:24806884, ECO:0000269\|PubMed:25920996}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025651720.1	0.0	transcription factor KUA1-like
Refseq	XP_025698372.1	0.0	transcription factor KUA1-like
Swissprot	Q9LVS0	1e-121	KUA1_ARATH; Transcription factor KUA1
TrEMBL	V5T714	0.0	V5T714_ARAHY; Putative MYB-related protein 22
STRING	XP_007155690.1	1e-167	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47390.1	1e-120	MYB_related family protein

Publications ? help Back to Top
Liu C,Wang B,Li Z,Peng Z,Zhang J TsNAC1 Is a Key Transcription Factor in Abiotic Stress Resistance and Growth. Plant Physiol., 2018. 176(1): p. 742-756 [PMID:29122985]