PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy003428

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

NAC

Protein Properties

Length: 408aa MW: 45406.3 Da PI: 8.3292

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S58460540	PU_unref	Unigene	View CDS
PUT-171a-Arachis_hypogaea-4544	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.9	1.6e-52	7	131	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 lppGfrFhPtdeelv +yL++k++++++ + +i+e+d+yk++PwdLp +++ +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ + + v Ahy003428 7 LPPGFRFHPTDEELVLHYLCRKCTSQPIAV-PIIPEIDLYKYDPWDLPGMASYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGQ--PKPV 103 79************************99.88***********8777899**********************************98..789 PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 g+kk Lvfy+g+apkg kt+W+mheyrl Ahy003428 104 GIKKALVFYSGKAPKGDKTNWIMHEYRL 131 **************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	7.98E-58	4	136	IPR003441	NAC domain
PROSITE profile	PS51005	57.334	7	158	IPR003441	NAC domain
Pfam	PF02365	3.3E-27	8	131	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence Send to blast
MASELQLPPG FRFHPTDEEL VLHYLCRKCT SQPIAVPIIP EIDLYKYDPW DLPGMASYGE 60 KEWYFFSPRD RKYPNGSRPN RAAGTGYWKA TGADKPIGQP KPVGIKKALV FYSGKAPKGD 120 KTNWIMHEYR LADVDRSVRK KNKPQAGMTG CWCRIYNKKG SIEKQQPEQR RQVPVVNQKA 180 ESSEVEDKKP DIVPRGGGGG VLPPHPPTAQ ASAGGVTTDY MYFDNSDSVP KLHTDSSCSE 240 QVVSPEFASE VQSEPKWNEW DKNLESAYNY LDATLTNGFG FPFQGNNQMS PLQDMFMNLP 300 NRSERASNSR TPEKESFYGK PLICTMVHST AARDVKVHEC ACAGASPWMG QRDGTARGES 360 EEGKMKKMHA LGVQHCAPID LGRGIRISFG ESDGGCWVVA RFARLGCV

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence Send to blast

MASELQLPPG FRFHPTDEEL VLHYLCRKCT SQPIAVPIIP EIDLYKYDPW DLPGMASYGE  60
KEWYFFSPRD RKYPNGSRPN RAAGTGYWKA TGADKPIGQP KPVGIKKALV FYSGKAPKGD  120
KTNWIMHEYR LADVDRSVRK KNKPQAGMTG CWCRIYNKKG SIEKQQPEQR RQVPVVNQKA  180
ESSEVEDKKP DIVPRGGGGG VLPPHPPTAQ ASAGGVTTDY MYFDNSDSVP KLHTDSSCSE  240
QVVSPEFASE VQSEPKWNEW DKNLESAYNY LDATLTNGFG FPFQGNNQMS PLQDMFMNLP  300
NRSERASNSR TPEKESFYGK PLICTMVHST AARDVKVHEC ACAGASPWMG QRDGTARGES  360
EEGKMKKMHA LGVQHCAPID LGRGIRISFG ESDGGCWVVA RFARLGCV

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	2e-69	3	164	11	174	Stress-induced transcription factor NAC1
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016163504.1	0.0	NAC domain-containing protein 2
Refseq	XP_025666750.1	0.0	NAC domain-containing protein 2
Swissprot	Q39013	1e-133	NAC2_ARATH; NAC domain-containing protein 2
TrEMBL	B2ZHY3	0.0	B2ZHY3_ARAHY; NAC-like transcription factor
STRING	XP_004502479.1	1e-168	(Cicer arietinum)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01720.1	1e-130	NAC family protein

Publications ? help Back to Top
Florentin A,Damri M,Grafi G Stress induces plant somatic cells to acquire some features of stem cells accompanied by selective chromatin reorganization. Dev. Dyn., 2013. 242(10): p. 1121-33 [PMID:23798027] Jensen MK, et al. ATAF1 transcription factor directly regulates abscisic acid biosynthetic gene NCED3 in Arabidopsis thaliana. FEBS Open Bio, 2013. 3: p. 321-7 [PMID:23951554] Wang YX Characterization of a novel Medicago sativa NAC transcription factor gene involved in response to drought stress. Mol. Biol. Rep., 2013. 40(11): p. 6451-8 [PMID:24057250] Yang X, et al. Overexpression of a Miscanthus lutarioriparius NAC gene MlNAC5 confers enhanced drought and cold tolerance in Arabidopsis. Plant Cell Rep., 2015. 34(6): p. 943-58 [PMID:25666276] Du Q,Wang H The role of HD-ZIP III transcription factors and miR165/166 in vascular development and secondary cell wall formation. Plant Signal Behav, 2015. 10(10): p. e1078955 [PMID:26340415] Takasaki H, et al. SNAC-As, stress-responsive NAC transcription factors, mediate ABA-inducible leaf senescence. Plant J., 2015. 84(6): p. 1114-23 [PMID:26518251] Liu Y,Sun J,Wu Y Arabidopsis ATAF1 enhances the tolerance to salt stress and ABA in transgenic rice. J. Plant Res., 2016. 129(5): p. 955-962 [PMID:27216423] Ghandchi FP,Caetano-Anolles G,Clough SJ,Ort DR Investigating the Control of Chlorophyll Degradation by Genomic Correlation Mining. PLoS ONE, 2016. 11(9): p. e0162327 [PMID:27618630] Zhao J,Missihoun TD,Bartels D The ATAF1 transcription factor is a key regulator of aldehyde dehydrogenase 7B4 (ALDH7B4) gene expression in Arabidopsis thaliana. Planta, 2018. 248(4): p. 1017-1027 [PMID:30027414]