PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy003617
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 334aa    MW: 36798 Da    PI: 7.9262
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58449838PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-27996PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH53.83.6e-17118164455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 hn  ErrRRdriN+++ +L++l+P++      K +Ka++Le+A+eY+ksLq
  Ahy003617 118 VHNLSERRRRDRINEKMRTLQQLIPNS-----NKTDKASMLEEAIEYLKSLQ 164
                6*************************7.....5******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.54E-21111177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088818.463114163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.07E-19117168No hitNo description
PfamPF000101.3E-14118164IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.1E-19118172IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-17120169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
XDQVTCGSNN IIPQEQDTTF SEAVKDCVQR SVPNWSNNKG KSSEMIEATV TSSSGGSGSS  60
LGKTTCSLST GNHLSLKRKI TDADESEEQS EATEPKSGVG NKTSQRSGSS RRNRAAEVHN  120
LSERRRRDRI NEKMRTLQQL IPNSNKTDKA SMLEEAIEYL KSLQLQLQVM WMGAGMTPVM  180
FPGIQHYMSQ MSAMGMAAAS QPSLPSMQNP MQIPRMPLDQ SNMPSTVSVP HHQTPSNQAL  240
MCQNPVLGAF NYQNHQMQNP CLADQYARYM AYHHLMQTAS QPMNVFGYGS QAVQQSQTMM  300
PPSNNNGTMN VAPNFEDAIT AKMGTSTFQQ LNNN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1122127ERRRRD
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015973330.10.0transcription factor PIF4
RefseqXP_015973331.10.0transcription factor PIF4
RefseqXP_015973332.10.0transcription factor PIF4
RefseqXP_015973333.10.0transcription factor PIF4
TrEMBLA0A445C3W40.0A0A445C3W4_ARAHY; Uncharacterized protein
STRINGGLYMA02G45150.11e-122(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43010.27e-47phytochrome interacting factor 4