PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy003673

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

LBD

Protein Properties

Length: 321aa MW: 34938.6 Da PI: 8.9174

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S58472441	PU_unref	Unigene	View CDS
PUT-171a-Arachis_hypogaea-10169	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	100.6	1.5e-31	18	121	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +C++C+vlr++C+++C ++p++ p++q++++ +++k++G++ +++l++a pe+ r+++++sl+yeA+ r+ +P+yG+vg+++++++ql+q+++e++ Ahy003673 18 SCNGCRVLRKGCSENCSIRPCLqwiksPESQANATVFLAKFYGRAGLMNLVNAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAV 117 6*************************************************************************************************99 PP DUF260 96 llke 99 l ++ Ahy003673 118 LKGA 121 8766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PIRSF	PIRSF038155	1.7E-95	15	312	IPR017414	LOB domain-containing protein 10/36/41
PROSITE profile	PS50891	17.059	17	123	IPR004883	Lateral organ boundaries, LOB
Pfam	PF03195	5.5E-25	18	116	IPR004883	Lateral organ boundaries, LOB

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence Send to blast
GLILPHRKKI DQVKMRMSCN GCRVLRKGCS ENCSIRPCLQ WIKSPESQAN ATVFLAKFYG 60 RAGLMNLVNA GPEHLRPAIF RSLLYEACGR IVNPIYGSVG LLWSGSWQLC QAAVEAVLKG 120 APITPITSEA AANGRGPPLK AYDIRHVTKD DSNSALSTHN PSHPLKTRSR KRSHSQPKPK 180 TKPNAQKLTT TATTTTTALL NVDEVVNHSA SLDHESSLSH QSELVTAAEG GGESKERESE 240 SIVSVETTAE AASVLFRDEP ESNRKRVERT DEDRSGLGLD LTLGFEPVSS SARADQVVPV 300 KKRRFDLKDY GEMGLGLECP A

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016194776.1	0.0	LOB domain-containing protein 41
Refseq	XP_025650546.1	0.0	LOB domain-containing protein 41-like
Refseq	XP_025697284.1	0.0	LOB domain-containing protein 41-like
Swissprot	Q9M886	1e-101	LBD41_ARATH; LOB domain-containing protein 41
TrEMBL	A0A445D9Y8	0.0	A0A445D9Y8_ARAHY; Uncharacterized protein
STRING	XP_004489144.1	1e-138	(Cicer arietinum)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02550.1	6e-98	LOB domain-containing protein 41