PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy003753

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

DBB

Protein Properties

Length: 305aa MW: 32977.6 Da PI: 5.9485

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-171a-Arachis_hypogaea-20650	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.8	8.1e-07	15	54	4	37
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + C+ ++ + lfC+ ++ +lC C +++H H Ahy003753 15 KPCDSCKIASAALFCRPDSAFLCIACDSKIHCAnklasrH 54 68****99******************9554555556 PP
2	zf-B_box	27.6	6.2e-09	56	102	2	42
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 + ++C+ +e+ ++ C+ + lC +C + +H+ H+++p+ Ahy003753 56 RVWMCEVCEQAPAAVTCKADAAALCVTCDSDIHSAnplarrHERIPV 102 5789*****************************66889999999885 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00336	1.3E-9	12	59	IPR000315	B-box-type zinc finger
PROSITE profile	PS50119	9.926	12	59	IPR000315	B-box-type zinc finger
CDD	cd00021	9.15E-6	16	59	No hit	No description
PROSITE profile	PS50119	10.751	55	102	IPR000315	B-box-type zinc finger
Pfam	PF00643	5.3E-7	57	102	IPR000315	B-box-type zinc finger
CDD	cd00021	7.39E-7	58	102	No hit	No description
SMART	SM00336	4.5E-10	60	102	IPR000315	B-box-type zinc finger

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005622	Cellular Component	intracellular
GO:0008270	Molecular Function	zinc ion binding

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence Send to blast
MGLKGLRSGW TVPPKPCDSC KIASAALFCR PDSAFLCIAC DSKIHCANKL ASRHDRVWMC 60 EVCEQAPAAV TCKADAAALC VTCDSDIHSA NPLARRHERI PVEPFFDSAD SIVKASAASF 120 SFVVPTDNGI SSDGFPNDDA AWLIPNPNYG SKLMDAPDMK SREMFFSEMD PFLDFDYSNS 180 FQNNNNNNSA GNDSVVPVQS KPAPMMNHHA EGSCFDIDFC RSKLSSFNYP SQSISQSVSS 240 SSLDVGVVPD GNTVSDISYS FGRNCSDSSG MGSAGSGGGA TQLCGMDREA RVLRYREKRK 300 NRKFX

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016200841.1	0.0	zinc finger protein CONSTANS-LIKE 5
Swissprot	Q9FHH8	3e-95	COL5_ARATH; Zinc finger protein CONSTANS-LIKE 5
TrEMBL	A0A445AV41	0.0	A0A445AV41_ARAHY; Uncharacterized protein
STRING	XP_007154800.1	1e-169	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57660.1	3e-84	CONSTANS-like 5

Publications ? help Back to Top
Vercruyssen L, et al. ANGUSTIFOLIA3 binds to SWI/SNF chromatin remodeling complexes to regulate transcription during Arabidopsis leaf development. Plant Cell, 2014. 26(1): p. 210-29 [PMID:24443518]