PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy003925
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 280aa    MW: 31872 Da    PI: 5.2318
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58471477PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-25889PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.71e-1393143154
                CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                +r++h ++Er+RR+++N+ ++ Lr l+P +   + ++ + a+i   A++Y+k L
  Ahy003925  93 QRMTHIAVERNRRKQMNDYLSLLRNLMPDS---YVQRGDQASIIGGAINYVKVL 143
                79****************************...9*****************977 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.16E-1291148No hitNo description
SuperFamilySSF474597.07E-1792157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.09792143IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-1393155IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.8E-1193143IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.7E-998149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
MALEAVLYTN NIQQPLPSSY AINDTNKDLD FFNFNNEEDQ HQFIDTGLHY LLSPPPPPPE  60
ETETTMDTTS TCSERPKRRR GKTRKNKEEI ENQRMTHIAV ERNRRKQMND YLSLLRNLMP  120
DSYVQRGDQA SIIGGAINYV KVLEQKLQFL AAHKEITTTT TDEDEGSDLT NNKTGTMPFS  180
EFFGFPQVTG NADIEVTMVE SHANLKIRSK KKPKQLLKMV SNLQAMRLTI LHLNVTTTNN  240
DIVLYSLSVK VEDDCKLGSV DEIATAVCQM MENIQHESVE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
193104RMTHIAVERNRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016205493.10.0transcription factor bHLH96
RefseqXP_025662552.10.0transcription factor bHLH96
SwissprotQ9C7T41e-74BH096_ARATH; Transcription factor bHLH96
TrEMBLA0A444YK520.0A0A444YK52_ARAHY; Uncharacterized protein
STRINGGLYMA19G42520.11e-101(Glycine max)
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]