PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy005581
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 183aa    MW: 20565.2 Da    PI: 4.8707
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58467910PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-25266PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.71.3e-1018100897
                -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
         B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                ++v   g+l lp kf +++g   +++  + l+ ++g  W++    + ++g + +++GW+eF++   L+ g  ++F ++++s+   +v+++
  Ahy005581  18 KSVED-GNLKLPEKFSKKYGDGVPNP--VYLKPPDGTAWKIDW--SLYDGVIQFENGWNEFASYYALDNGNLLMFVYNETSN--IKVHIL 100
                55555.55***********5554565..***************..99999999***********************976444..477776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019365.3E-175101IPR015300DNA-binding pseudobarrel domain
CDDcd100172.68E-810101No hitNo description
PROSITE profilePS5086310.88410103IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.104.0E-1510101IPR015300DNA-binding pseudobarrel domain
SMARTSM010193.6E-711103IPR003340B3 DNA binding domain
PfamPF023629.9E-817100IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MASSISSDIR FFKIGLGKSV EDGNLKLPEK FSKKYGDGVP NPVYLKPPDG TAWKIDWSLY  60
DGVIQFENGW NEFASYYALD NGNLLMFVYN ETSNIKVHIL DIIYGLEINY PSLDHIGDDN  120
SIEILNELPP RGWPRKRLKA APEVSSPSTS KILRSSVKTG DVEKGPDKQN WMQCCNNEEA  180
SQS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025624622.11e-133B3 domain-containing transcription factor VRN1
TrEMBLA0A444X9W72e-99A0A444X9W7_ARAHY; Uncharacterized protein
TrEMBLA0A444XA764e-95A0A444XA76_ARAHY; Uncharacterized protein
TrEMBLA0A445B1P93e-96A0A445B1P9_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.19e-16B3 family protein