PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy005640
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 180aa    MW: 20592.6 Da    PI: 9.777
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-171a-Arachis_hypogaea-10712PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.76.5e-111567255
               HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
        HLH  2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
               r+  + +Er RR++++  +++L +llP+     + +  s  + Le+A++YIk+Lq
  Ahy005640 15 RTERKFIERERRSQMKALYSNLNSLLPPqT--SREGISSLPDQLEEATNYIKKLQ 67
               6777889*********************55..69999*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.32E-101386IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.7911366IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.46E-51367No hitNo description
PfamPF000102.0E-71567IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-91580IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    Send to blast
MEKKHHPGGS TCSTRTERKF IERERRSQMK ALYSNLNSLL PPQTSREGIS SLPDQLEEAT  60
NYIKKLQVKP EKMKEKKNTL LGTIHQIPNN RSPQIEIQQM GFTLMVVLIT ALDSHYFMFI  120
EATRVLHEEG ADVVSASYKV VQHAVFHTMH RQVGEYGNGA AARISERLKK FVNDSTYCPF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025621984.11e-130transcription factor bHLH162
SwissprotF4JIJ72e-40BH162_ARATH; Transcription factor bHLH162
TrEMBLA0A445BBH71e-129A0A445BBH7_ARAHY; Uncharacterized protein
STRINGGLYMA13G31211.11e-64(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.11e-42bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]