PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy006118
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GATA
Protein Properties Length: 159aa    MW: 17980.7 Da    PI: 8.7191
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58437859PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-11192PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA29.21.3e-091938120
       GATA  1 CsnCgttkTplWRrgpdgnk 20
               Cs C+ttkTplWR gp g+k
  Ahy006118 19 CSDCKTTKTPLWRGGPAGPK 38
               ******************98 PP
2GATA22.51.6e-0768812134
       GATA 21 tLCnaCGlyyrkkg 34
               +LCnaCG++yrk++
  Ahy006118 68 SLCNACGIRYRKRR 81
               5***********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501149.131336IPR000679Zinc finger, GATA-type
SMARTSM004013.1E-51392IPR000679Zinc finger, GATA-type
SuperFamilySSF577168.08E-51637No hitNo description
Gene3DG3DSA:3.30.50.103.0E-71738IPR013088Zinc finger, NHR/GATA-type
PfamPF003203.0E-71938IPR000679Zinc finger, GATA-type
CDDcd002021.75E-81999No hitNo description
Gene3DG3DSA:3.30.50.102.7E-46797IPR013088Zinc finger, NHR/GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
MDLNKEWVCE ELSESKKCCS DCKTTKTPLW RGGPAGPKVI PSNFNFFFFI GCVMQNIXFL  60
LFVFLDQSLC NACGIRYRKR RASAVGMRKG QERKRERSQN GGSSSSSDNE LKESLKVNLM  120
ALGEEFWLLK KKQRSMCLLG EEEQAAVCLM ALSCGYVFA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015968671.15e-78GATA transcription factor 16
RefseqXP_025603745.15e-78GATA transcription factor 16
TrEMBLA0A445CNB11e-76A0A445CNB1_ARAHY; Uncharacterized protein
STRINGVIT_14s0060g01520.t011e-38(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.13e-13GATA transcription factor 15