PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy007332
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C3H
Protein Properties Length: 292aa    MW: 32306.6 Da    PI: 7.3724
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59555376PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.71.7e-07127147526
                --SGGGGTS--TTTTT-SS-SS CS
    zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                +C+ f++ G C+ Gd C +aHg
  Ahy007332 127 PCPEFRK-GSCSKGDFCEYAHG 147
                8******.*************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003563.5E-4122148IPR000571Zinc finger, CCCH-type
PfamPF006427.4E-5127147IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010312.671127149IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.109.0E-5155185IPR000571Zinc finger, CCCH-type
SMARTSM003562.4157180IPR000571Zinc finger, CCCH-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
CDLVVSGANS IPNSRKRVLQ AMLEGTVGTD KTLEDVVGQI EEQQRENAVN MPRVLKDAAE  60
RKDYPVDHSL PDIKNGIYGT DEFRMYTFKV KPCSRAYSHD WTECPFVHPG ENARRRDPRK  120
YHYSCVPCPE FRKGSCSKGD FCEYAHGIFE CWLHPAQYRT RLCKDEGACT RRVCFFAHKP  180
EELRPLYAST GSAMPSPRSY SSGSSLDMGP VSPITLGSPS VMIPPASTPP LTPSGSSSPL  240
SGSMWQTQSN IPTLQLPRSS RLKTALAASD INSDTELLML MMDEMTGLSS PS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016166467.10.0zinc finger CCCH domain-containing protein 66
RefseqXP_025664042.10.0zinc finger CCCH domain-containing protein 66
SwissprotQ9LUZ41e-113C3H66_ARATH; Zinc finger CCCH domain-containing protein 66
TrEMBLA0A444YAV00.0A0A444YAV0_ARAHY; Uncharacterized protein
STRINGXP_007142205.11e-151(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58620.12e-98C3H family protein