PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy007452
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 566aa    MW: 64890.8 Da    PI: 5.9729
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59548988PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR188.97.2e-2880168291
       FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                fYn+YA+++GFs+r+s   +s+++ ++++r+ vCs+eg+r++ +++  + +r+r++tr+gCka+++vkk+   gkw+++k+ ++HnH+l+p
  Ahy007452  80 FYNAYARRIGFSTRVSVCLRSRKDSSVIRRRVVCSREGFRRNPENH--DPKRHRSVTRVGCKAQITVKKKGpLGKWYISKFIKDHNHDLVP 168
                9*****************************************9988..9999******************99****************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.7E-2580168IPR004330FAR1 DNA binding domain
PfamPF105511.3E-24289378IPR018289MULE transposase domain
Sequence ? help Back to Top
Protein Sequence    Length: 566 aa     Download sequence    Send to blast
MRHRNVPQSM DLEMEATGFE SEEEEEEEDD EDDEEEQHPT NQNNDNNNYN NPSSSNSNPN  60
STTEPYIGME FDSELSARAF YNAYARRIGF STRVSVCLRS RKDSSVIRRR VVCSREGFRR  120
NPENHDPKRH RSVTRVGCKA QITVKKKGPL GKWYISKFIK DHNHDLVPPD RVHCLRSHRR  180
VNGAARSLID TLHAAGMGAA EVMTVLIKES GGIDNVGFTK VDCQNYMTSS SGASGXGNQL  240
VFDFLKKMSE EDPSGFFYSF QGDSESSSGN IFWADGNARR NYEYFGDAVV FDMAYRRGRY  300
KVPFAPFTGW NHHGQPVLFG CALMLNESEA SFVWLFTTWL QAMYGRHPVS ITTDQDRIIH  360
SAVLQVFPDT RHRFSKWDVF GEVQERLIDV CGVHPEFESE FRRCVNSAET VDEFESSWKF  420
LVGRYELLDN EWLQLMYRNR HQWVPVYLRD TFFGDLSAIH GSDTSSSYFD GFINATTTVQ  480
TLIKQYEKGV ADRYEKEVKE DYDTLNTAPI LRTPSPMEKQ AAGLYTRKKF SKAELVETLA  540
YAATLMDDAR SQATYRVAKY GEENRA
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription activator involved in regulating light control of development.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated in hypocotyls by far-red light treatment. {ECO:0000269|PubMed:15591448}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016179845.10.0protein FAR1-RELATED SEQUENCE 5 isoform X1
RefseqXP_016179846.10.0protein FAR1-RELATED SEQUENCE 5 isoform X1
RefseqXP_016179847.10.0protein FAR1-RELATED SEQUENCE 5 isoform X1
RefseqXP_016179848.10.0protein FAR1-RELATED SEQUENCE 5 isoform X1
RefseqXP_020969656.10.0protein FAR1-RELATED SEQUENCE 5 isoform X1
RefseqXP_020969657.10.0protein FAR1-RELATED SEQUENCE 5 isoform X1
RefseqXP_025684446.10.0protein FAR1-RELATED SEQUENCE 5 isoform X1
RefseqXP_029151885.10.0protein FAR1-RELATED SEQUENCE 5 isoform X1
SwissprotQ9SZL80.0FRS5_ARATH; Protein FAR1-RELATED SEQUENCE 5
TrEMBLA0A445B0R70.0A0A445B0R7_ARAHY; Uncharacterized protein
STRINGEOY158670.0(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.10.0FAR1-related sequence 5
Publications ? help Back to Top
  1. Joly-Lopez Z, et al.
    Abiotic Stress Phenotypes Are Associated with Conserved Genes Derived from Transposable Elements.
    Front Plant Sci, 2017. 8: p. 2027
    [PMID:29250089]