PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy007701
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 619aa    MW: 69639.8 Da    PI: 10.073
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58460688PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-22547PU_unrefplantGDBView CDS
PUT-171a-Arachis_hypogaea-4991PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.51.3e-1420109298
                EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
         B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                fk+ ++  +l  g l +p kf ++hg++ +++  + l+ ++g +W++    ++++++++++kGWkeF+    L+ g  + Fk++g+s+   +v +f+
  Ahy007701  20 FKIILR-KSLDDGYLKIPTKFSRKHGNNMPNP--VYLKPPDGTQWKIDW--TNNGDEILFQKGWKEFATFYTLDNGHLLWFKYNGTSNI--KVNIFD 109
                555544.4455667***********9997776..***************..*******************************9986555..888886 PP
2B341.91.8e-132443221799
                E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
         B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                +lp  f++ + +++++       +   ++W  +liy  ++++ +++ +W+ Fvk+n++k+gD+++F+l++r++ el+v+++r+
  Ahy007701 244 SLPVCFFRMYFENTKQ---YATLHVGKKQWHATLIYYPYKKSAIIS-NWRLFVKENNIKAGDVCIFELINRQDPELKVHIRRS 322
                7888888888656444...44455677*********9999998887.***********************99999*****996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019369.61E-1918118IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086312.60518111IPR003340B3 DNA binding domain
CDDcd100179.12E-1118109No hitNo description
Gene3DG3DSA:2.40.330.103.9E-1919111IPR015300DNA-binding pseudobarrel domain
SMARTSM010194.7E-1119111IPR003340B3 DNA binding domain
PfamPF023629.1E-1221109IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.108.5E-18221322IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019366.67E-16222322IPR015300DNA-binding pseudobarrel domain
SMARTSM010192.0E-7229323IPR003340B3 DNA binding domain
CDDcd100173.14E-11244321No hitNo description
PfamPF023626.7E-11244322IPR003340B3 DNA binding domain
PROSITE profilePS5086310.264268323IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 619 aa     Download sequence    Send to blast
MASSSFQKNK HSLFTVIRFF KIILRKSLDD GYLKIPTKFS RKHGNNMPNP VYLKPPDGTQ  60
WKIDWTNNGD EILFQKGWKE FATFYTLDNG HLLWFKYNGT SNIKVNIFDM SGLEIEYTSN  120
GRIGDDNLVE TLEEPPPRRG RGRPKKKVIA EPKQSCPSTS KKMKRAIKTK DMDKSPNTQN  180
LKQHVKFKIE EDGQSEETTD IKQPIVQCAR PDIDVIREAR KFKSKNPSFV IKIRQKHQAG  240
SPASLPVCFF RMYFENTKQY ATLHVGKKQW HATLIYYPYK KSAIISNWRL FVKENNIKAG  300
DVCIFELINR QDPELKVHIR RSHXLANDNA CVADQWCMFR DQEFSSHLNG CIEVISPSTI  360
TRNVSVINAX NNTFGIIAVG SKDVIWTKYL IKSYPTTYFQ RQKKKKKDRL EPKGFXIQTL  420
SVPTSSGINA ELPLRPGAPK LFHTMSKTTS ALLILSLYVL ANLNNGVEAA GRGSIPRTDA  480
EKDHHNDLLY GPQHWFFFSP FFHPFWFGHL LPWFPLHHDS PPFDIPPYKG DGGYGPGPFG  540
GDGLLKGGGK GPIDGLPVKG GDGGYGGKGP IDVPPVKGGD DGGGKGPIDG PPIKGDDVSY  600
YGKSSLTGTD RPKHYKSHG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1576584KGGDDGGGK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016179824.10.0B3 domain-containing transcription factor VRN1 isoform X1
RefseqXP_025683457.10.0B3 domain-containing transcription factor VRN1 isoform X1
TrEMBLA0A444XAP90.0A0A444XAP9_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-27B3 family protein