PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy008035
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 813aa    MW: 92353.6 Da    PI: 8.4612
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59543109PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR172.77.9e-2373163291
       FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                 Y +YA+ +GF vrk  + +  ++g+  +r+f Cskegkr+e+  +  +++r++ra trt+C+a+l v +++ +++w+v+kl+++HnH+l+p
  Ahy008035  73 LYVRYARCLGFGVRKGDTARG-KDGTQRRRRFFCSKEGKRAEKYISsLSRKREHRALTRTSCEAMLAVYLDTkTSTWRVKKLVEKHNHDLVP 163
                7****************9998.77789**************998775789999*****************9999***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.1E-2073163IPR004330FAR1 DNA binding domain
PfamPF105513.3E-34284378IPR018289MULE transposase domain
PROSITE profilePS509669.866561597IPR007527Zinc finger, SWIM-type
SMARTSM005750.0038572599IPR006564Zinc finger, PMZ-type
SuperFamilySSF577566.8E-5704732IPR001878Zinc finger, CCHC-type
Gene3DG3DSA:4.10.60.101.9E-4710730IPR001878Zinc finger, CCHC-type
PROSITE profilePS501588.96713729IPR001878Zinc finger, CCHC-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 813 aa     Download sequence    Send to blast
XRAPSMSLSK SAMDVDSEPL SSQENVEDCM MTSVEENVNC TCDCGGSSSK CVTVTADDII  60
NQTFETLDAA YNLYVRYARC LGFGVRKGDT ARGKDGTQRR RRFFCSKEGK RAEKYISSLS  120
RKREHRALTR TSCEAMLAVY LDTKTSTWRV KKLVEKHNHD LVPQCLVHLI PNHRGLTEPQ  180
KAQANTMHDH GLPTSKIMGL MVGQAGGYAN VGFTKKDLDN HFQRARRAML IGGDSNATIS  240
YLLGKADVDP MAMTRYSATD EGRLANLFWA DGICRSDYQC FGDVLAFDTT YRKNKYRRPL  300
VIFSGCNHHR QTCIFGFALV EDERTATYTW LLQNFLEVML NKSPSVVVTD GDEAMKAAIR  360
EIFPDATHRL CGWHIQKNVT AKIKNKKFSN DFKRCLYTPW HPDEFEEYWE NMIKKYGLEE  420
NEWVLSEYEK RKSWASAYLR DKFCAGFRTT SRCEAINNFI KRFIGIRQSL LELVQNLEHA  480
LRDYRNNELV SQFKTLYGEP VLTTGLEALE LSAANFYTRE ILGDVKKEIQ GVVALDVINE  540
ENISTTVVLK VKECDRRQHT YNVLYDRNTE HMECECSRWS SEGIPCRHMF CAMKRVGLQK  600
LPDSLLLRRW SKDAKKYLDE SSAGGTTQDR EREFLMRYGA LSVAATWMVF LGAQDGPSFH  660
DTMNEVYRWT QTLEQKSDLK RQTTDSTTPN FVGDPSVVKT KGAPKGKKER GKRRCTKCNS  720
AGHVKNKCPV RNDDDDLGDK TGNGGKLALV PRRSVRYNIA LVVIQETLAV PNTEVNVPVQ  780
QESGLGDSGL INGHENPIPP YGSHQWLLQV VQQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025651266.10.0protein FAR1-RELATED SEQUENCE 5-like isoform X1
RefseqXP_025651267.10.0protein FAR1-RELATED SEQUENCE 5-like isoform X1
RefseqXP_025651268.10.0protein FAR1-RELATED SEQUENCE 5-like isoform X1
RefseqXP_025651269.10.0protein FAR1-RELATED SEQUENCE 5-like isoform X2
RefseqXP_025697920.10.0protein FAR1-RELATED SEQUENCE 5-like isoform X1
RefseqXP_025697921.10.0protein FAR1-RELATED SEQUENCE 5-like isoform X1
RefseqXP_025697922.10.0protein FAR1-RELATED SEQUENCE 5-like isoform X1
RefseqXP_025697923.10.0protein FAR1-RELATED SEQUENCE 5-like isoform X2
TrEMBLA0A444WVN30.0A0A444WVN3_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-97FAR1-related sequence 5