PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy008248

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 480aa MW: 55747.7 Da PI: 7.106

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59525140	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.1	4.7e-26	85	175	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y++ GFs+r+ ++ ++ g i+++tfvC+++g+re++ + ++++r+++ +tr+gC a++++k+++ +gkw+v++++ eHnHela Ahy008248 85 SFYNNYSRLKGFSMRQGRKVTN-SAGDIVRYTFVCNRQGYREKKWLEmANRKREHKIVTRCGCLAEMRIKRKDgSGKWYVSRFVDEHNHELA 175 5**************99998.6677***********99877678899999********************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.9E-23	85	175	IPR004330	FAR1 DNA binding domain
Pfam	PF10551	6.0E-35	295	389	IPR018289	MULE transposase domain

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence Send to blast
MGSCSRVVEG TCQWNVRSRD DWVQRSGVGL QEQEALYDMG IEAEEYFGDY ESKDDGRNEG 60 FDSDEGVGPD DVLRMEFNSP DEAKSFYNNY SRLKGFSMRQ GRKVTNSAGD IVRYTFVCNR 120 QGYREKKWLE MANRKREHKI VTRCGCLAEM RIKRKDGSGK WYVSRFVDEH NHELASGKFV 180 DYLRSHRRLS EVEIAQMTSL REVGISIPKI YESFAAQLGG FNLVTFTKQD MYNEVRRQRE 240 MQNGDVSAAI RYLEGVSRVD NRIFWRYKVG SENNLCDLFW SDGRSHFDYS IFGDVLAFDA 300 TYGRNKYNLP VVVFSGVNHH NQTCVFGCAM VSCETQESYI WVLQQFLECM EGKAPKAVIT 360 DGDTSMRNAI RHVFPETHHR LCAWHLLRNA TSNICDSRFT QLFRHCMLAD MEVDEFEAQW 420 EAMLDECGVR EVEWVKDLYR KKTAWATAYI RGRFFAGIRT TSRCESLHAK LGRFVESRYG

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence Send to blast

MGSCSRVVEG TCQWNVRSRD DWVQRSGVGL QEQEALYDMG IEAEEYFGDY ESKDDGRNEG  60
FDSDEGVGPD DVLRMEFNSP DEAKSFYNNY SRLKGFSMRQ GRKVTNSAGD IVRYTFVCNR  120
QGYREKKWLE MANRKREHKI VTRCGCLAEM RIKRKDGSGK WYVSRFVDEH NHELASGKFV  180
DYLRSHRRLS EVEIAQMTSL REVGISIPKI YESFAAQLGG FNLVTFTKQD MYNEVRRQRE  240
MQNGDVSAAI RYLEGVSRVD NRIFWRYKVG SENNLCDLFW SDGRSHFDYS IFGDVLAFDA  300
TYGRNKYNLP VVVFSGVNHH NQTCVFGCAM VSCETQESYI WVLQQFLECM EGKAPKAVIT  360
DGDTSMRNAI RHVFPETHHR LCAWHLLRNA TSNICDSRFT QLFRHCMLAD MEVDEFEAQW  420
EAMLDECGVR EVEWVKDLYR KKTAWATAYI RGRFFAGIRT TSRCESLHAK LGRFVESRYG

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020978571.1	0.0	protein FAR1-RELATED SEQUENCE 5-like isoform X2
TrEMBL	A0A445DWI7	0.0	A0A445DWI7_ARAHY; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-81	FAR1-related sequence 5