PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy008520

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

MYB_related

Protein Properties

Length: 349aa MW: 38344.4 Da PI: 4.728

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59519917	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29	2.5e-09	42	80	4	44
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 WT+ E +ll++ v ++G + W+++a+ ++ +++ +c+s++ Ahy008520 42 WTEGETLLLLESVMKHGDN-WDLVAQSVQ-TKSKLDCISKL 80 ***************77.*****.*******98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	2.6E-5	35	77	IPR009057	Homeodomain-like
PROSITE profile	PS51293	16.889	37	88	IPR017884	SANT domain
SMART	SM00717	1.9E-6	38	86	IPR001005	SANT/Myb domain
SuperFamily	SSF46689	1.25E-8	39	89	IPR009057	Homeodomain-like
Pfam	PF00249	1.8E-9	41	80	IPR001005	SANT/Myb domain
CDD	cd00167	1.81E-6	42	79	No hit	No description
Pfam	PF16495	3.8E-21	258	333	IPR032451	SMARCC, C-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence Send to blast
XKDNFMICAK CFTNKNYGDN RSAEDFTLTV SSENSGEQGA VWTEGETLLL LESVMKHGDN 60 WDLVAQSVQT KSKLDCISKL IELPFGELML GSAHRNGNSN SVNGYVNNVK QVQSSSSSSN 120 HQETSKAQDQ SHDLTNENEQ NGDAVEESPS KRQRVAPLSD TSSSLLMQVG LIASVVDPHI 180 TAAAADAATM ALCDENLCPR EIFDVEEDYA LSVNSANNSA RAHGDEGVEM KSSNQSEIDA 240 RGQKDGIPLT LRVRAAIATA LGAAAARAKL LADQEDREVE LLVATIIDAQ VKKLQHKVRH 300 FDDLELLMEK EHAEIEELKD SILTERIDVL RRTFRSGITR RKDYSYVKS

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence Send to blast

XKDNFMICAK CFTNKNYGDN RSAEDFTLTV SSENSGEQGA VWTEGETLLL LESVMKHGDN  60
WDLVAQSVQT KSKLDCISKL IELPFGELML GSAHRNGNSN SVNGYVNNVK QVQSSSSSSN  120
HQETSKAQDQ SHDLTNENEQ NGDAVEESPS KRQRVAPLSD TSSSLLMQVG LIASVVDPHI  180
TAAAADAATM ALCDENLCPR EIFDVEEDYA LSVNSANNSA RAHGDEGVEM KSSNQSEIDA  240
RGQKDGIPLT LRVRAAIATA LGAAAARAKL LADQEDREVE LLVATIIDAQ VKKLQHKVRH  300
FDDLELLMEK EHAEIEELKD SILTERIDVL RRTFRSGITR RKDYSYVKS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015937865.1	0.0	SWI/SNF complex subunit SWI3A
Refseq	XP_025616074.1	0.0	SWI/SNF complex subunit SWI3A
TrEMBL	A0A444XXH9	0.0	A0A444XXH9_ARAHY; Uncharacterized protein
TrEMBL	A0A445C1Z1	0.0	A0A445C1Z1_ARAHY; Uncharacterized protein
STRING	XP_004501720.1	1e-161	(Cicer arietinum)