PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy008705
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family HD-ZIP
Protein Properties Length: 214aa    MW: 24712.5 Da    PI: 8.7525
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59557365PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.35.3e-182481056
               HHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
   Homeobox 10 eqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
               eq+++Le+ Fe  +++  e++ +LA++lgL+ rq+ +WFqNrRa++k
  Ahy008705  2 EQVKALEKSFELGNKLEPERKMQLARSLGLQPRQIAIWFQNRRARWK 48
               8*********************************************9 PP
2HD-ZIP_I/II122.22.6e-39284991
  HD-ZIP_I/II  9 eqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
                 eqvk+LE+sFe  +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlE+dy++Lkr+++a+k++n++L++++++L++++
    Ahy008705  2 EQVKALEKSFELGNKLEPERKMQLARSLGLQPRQIAIWFQNRRARWKTKQLERDYDQLKRQFEAVKSDNDALHAQNQKLQAQI 84
                 9*******************************************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007116.795150IPR001356Homeobox domain
CDDcd000861.53E-13151No hitNo description
SMARTSM003892.7E-10154IPR001356Homeobox domain
SuperFamilySSF466893.55E-17259IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.1E-19249IPR009057Homeodomain-like
PfamPF000462.7E-15248IPR001356Homeobox domain
PRINTSPR000314.1E-62130IPR000047Helix-turn-helix motif
PROSITE patternPS0002702548IPR017970Homeobox, conserved site
PRINTSPR000314.1E-63046IPR000047Helix-turn-helix motif
PfamPF021831.5E-155090IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MEQVKALEKS FELGNKLEPE RKMQLARSLG LQPRQIAIWF QNRRARWKTK QLERDYDQLK  60
RQFEAVKSDN DALHAQNQKL QAQILALKNR EATTESINLN KDTEGSCSNR SENSSEIKFD  120
ISTRTPTTTT TTTTTIVDSP LSSKPFFPSS SSSTRPPHQL FQVSRPEIHL HQCHQQNNNN  180
NNHVVAKEES LSSMFVAMDD QSGFWPWLEQ QHFN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14250RRARWKTKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may act in the sucrose-signaling pathway. {ECO:0000269|PubMed:11292072}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025699140.11e-157homeobox-leucine zipper protein ATHB-13 isoform X2
SwissprotQ8LC032e-81ATB13_ARATH; Homeobox-leucine zipper protein ATHB-13
TrEMBLA0A444Z5I11e-118A0A444Z5I1_ARAHY; Uncharacterized protein
STRINGGLYMA02G02290.14e-96(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69780.12e-74HD-ZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Ribone PA,Capella M,Chan RL
    Functional characterization of the homeodomain leucine zipper I transcription factor AtHB13 reveals a crucial role in Arabidopsis development.
    J. Exp. Bot., 2015. 66(19): p. 5929-43
    [PMID:26136262]
  3. Wang X, et al.
    Overexpressed BRH1, a RING finger gene, alters rosette leaf shape in Arabidopsis thaliana.
    Sci China Life Sci, 2018. 61(1): p. 79-87
    [PMID:28887625]
  4. Ebrahimian-Motlagh S, et al.
    JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13.
    Front Plant Sci, 2017. 8: p. 2118
    [PMID:29326734]