PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy008870
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 86aa    MW: 9597.57 Da    PI: 8.9377
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59524018PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.16.3e-111458344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     +WT+   +l+ +a +++ ++   +W+ +ar++g ++t++++k ++
        Ahy008870 14 SWTPKQNKLFEKALAKYDKDtpdRWHNVAREVGGNKTAEEVKRHY 58
                     7*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129310.8191066IPR017884SANT domain
SMARTSM007171.3E-91164IPR001005SANT/Myb domain
SuperFamilySSF466893.29E-131370IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.609.4E-61468IPR009057Homeodomain-like
PfamPF002491.4E-81458IPR001005SANT/Myb domain
CDDcd001671.32E-61562No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 86 aa     Download sequence    Send to blast
MAASSNSSGG GESSWTPKQN KLFEKALAKY DKDTPDRWHN VAREVGGNKT AEEVKRHYEI  60
LLEDIKHIES GHVPTPNYKN NSTAKT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A3e-29779374RADIALIS
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015932742.12e-58protein RADIALIS-like 3
RefseqXP_025611437.12e-58protein RADIALIS-like 3
SwissprotQ1A1734e-32RADL6_ARATH; Protein RADIALIS-like 6
TrEMBLA0A445CE812e-56A0A445CE81_ARAHY; Uncharacterized protein
TrEMBLA0A445CFS73e-56A0A445CFS7_ARAHY; Uncharacterized protein
STRINGXP_008795931.16e-38(Phoenix dactylifera)
STRINGGSMUA_Achr2P22930_0016e-38(Musa acuminata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.15e-33RAD-like 6