PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy008909

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

HD-ZIP

Protein Properties

Length: 315aa MW: 36178.4 Da PI: 4.468

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59539293	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.1	7.4e-19	54	107	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq++ Le+ Fe+++++ e++ +LAk+lgL+ rqV +WFqNrRa+ k Ahy008909 54 KKRRLTSEQVQFLERSFEMENKLEPERKVQLAKELGLQPRQVAIWFQNRRARFK 107 6679************************************************98 PP
2	HD-ZIP_I/II	128	4e-41	54	145	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkrrl++eqv++LE+sFe+e+kLeperKv+la+eLglqprqva+WFqnrRAR+ktkqlEk+y aLk+++d+lk + e+L +++++L++e+++ Ahy008909 54 KKRRLTSEQVQFLERSFEMENKLEPERKVQLAKELGLQPRQVAIWFQNRRARFKTKQLEKEYGALKASFDKLKGDYESLLQQNDKLKQEVNA 145 9**************************************************************************************99975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	3.64E-20	40	111	IPR009057	Homeodomain-like
PROSITE profile	PS50071	17.848	49	109	IPR001356	Homeobox domain
SMART	SM00389	3.5E-18	52	113	IPR001356	Homeobox domain
Pfam	PF00046	2.9E-16	54	107	IPR001356	Homeobox domain
CDD	cd00086	2.22E-17	54	110	No hit	No description
Gene3D	G3DSA:1.10.10.60	6.8E-20	55	116	IPR009057	Homeodomain-like
PRINTS	PR00031	4.8E-6	80	89	IPR000047	Helix-turn-helix motif
PROSITE pattern	PS00027	0	84	107	IPR017970	Homeobox, conserved site
PRINTS	PR00031	4.8E-6	89	105	IPR000047	Helix-turn-helix motif
Pfam	PF02183	5.7E-16	109	150	IPR003106	Leucine zipper, homeobox-associated

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence Send to blast
MVVDFENGRG SSIRDRSFFQ QGLIEKEENN NNGCDDDYDP SCFQQTGSNG GNSKKRRLTS 60 EQVQFLERSF EMENKLEPER KVQLAKELGL QPRQVAIWFQ NRRARFKTKQ LEKEYGALKA 120 SFDKLKGDYE SLLQQNDKLK QEVNALRNKL IPRDKEDENC SSDEKSSPQD VDTINSNHNK 180 EEDEPVMMEL MISNSTSNEN GSKMPLPHPI ILTCKQEDAN SAKSDVLDDS ADSPHCTNNG 240 NHHHHHHHFS SFMEEEPADS DDFSQDDDDN LSENLLTLPC LPKVEDNDAC YHEQNENTCG 300 FGFPVEDQTF CFWPY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	101	109	RRARFKTKQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016202544.1	0.0	homeobox-leucine zipper protein ATHB-20
Refseq	XP_025654541.1	0.0	homeobox-leucine zipper protein ATHB-20
TrEMBL	A0A444Z5X3	0.0	A0A444Z5X3_ARAHY; Uncharacterized protein
STRING	GLYMA01G04890.1	1e-126	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	5e-42	homeobox 1