PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy008979
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family HD-ZIP
Protein Properties Length: 187aa    MW: 20854.5 Da    PI: 8.611
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59538513PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.62.6e-193488256
               T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
   Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
               rk+ ++tkeq   Le+ F+++++++ ++++ LAk+l+L  rqV vWFqNrRa+ k
  Ahy008979 34 RKKLRLTKEQSALLEDSFKQHSTLNPKQKQALAKQLNLRPRQVEVWFQNRRARTK 88
               78889************************************************98 PP
2HD-ZIP_I/II126.51.1e-4034123191
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                  +kk+rl+keq++lLE+sF+++++L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en+rL+ke +eL+ +l
    Ahy008979  34 RKKLRLTKEQSALLEDSFKQHSTLNPKQKQALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQELK-AL 123
                  69*************************************************************************************9.55 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.607.6E-191984IPR009057Homeodomain-like
SuperFamilySSF466893.42E-192391IPR009057Homeodomain-like
PROSITE profilePS5007117.4753090IPR001356Homeobox domain
SMARTSM003893.2E-163294IPR001356Homeobox domain
CDDcd000862.20E-163491No hitNo description
PfamPF000461.2E-163488IPR001356Homeobox domain
PROSITE patternPS0002706588IPR017970Homeobox, conserved site
PfamPF021832.9E-1090124IPR003106Leucine zipper, homeobox-associated
SMARTSM003403.5E-2590133IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    Send to blast
XDEAEAEATE IERLSSRISD EEEDGGTTAS AAARKKLRLT KEQSALLEDS FKQHSTLNPK  60
QKQALAKQLN LRPRQVEVWF QNRRARTKLK QTEVDCEFLK KCCETLTDEN RRLQKELQEL  120
KALKLSQPLY MPPMPAATLT ICPSCDRAVA IGSGGSASNN IKNTPLISLA PKPHHFFSPF  180
TNPSAAC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18290RRARTKLKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016186424.11e-135homeobox-leucine zipper protein HAT22
RefseqXP_025627360.11e-135homeobox-leucine zipper protein HAT22 isoform X2
SwissprotP466041e-78HAT22_ARATH; Homeobox-leucine zipper protein HAT22
TrEMBLA0A445ARE61e-133A0A445ARE6_ARAHY; Uncharacterized protein
STRINGXP_002530591.12e-94(Ricinus communis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.14e-70HD-ZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Liu T,Longhurst AD,Talavera-Rauh F,Hokin SA,Barton MK
    The Arabidopsis transcription factor ABIG1 relays ABA signaled growth inhibition and drought induced senescence.
    Elife, 2017.
    [PMID:27697148]
  3. Song L, et al.
    A transcription factor hierarchy defines an environmental stress response network.
    Science, 2017.
    [PMID:27811239]