PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy009075
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C3H
Protein Properties Length: 197aa    MW: 20061.6 Da    PI: 10.2414
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58454638PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-9093PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.91.3e-06177196525
                --SGGGGTS--TTTTT-SS-S CS
    zf-CCCH   5 lCrffartGtCkyGdrCkFaH 25 
                 C+ f+++G+Ck G++C F+H
  Ahy009075 177 VCK-FHESGHCKKGASCDFMH 196
                588.***************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5010312.08172197IPR000571Zinc finger, CCCH-type
SuperFamilySSF902291.05E-5175196IPR000571Zinc finger, CCCH-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
EPWRPPSSNS QSNIAAAAPS NVPYAGWGMP GNQNINWSGP LPANVNVNWM PGQGPGPSNA  60
TPVWGAPSQG PPAANAVGWV APGQGRPHVN ANAGWVAPGQ GPTVGSTNPG WGSSSGNPGT  120
WGGEQSRNGE RFHSQGDRGT HGGDSGYGGK SWNRQSSFNG SGRGGSSRPS VGGQRGVCKF  180
HESGHCKKGA SCDFMHT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020982429.11e-133LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 19
TrEMBLA0A445CFJ01e-131A0A445CFJ0_ARAHY; Uncharacterized protein
TrEMBLA0A445CFJ21e-132A0A445CFJ2_ARAHY; Uncharacterized protein
TrEMBLA0A445CFJ71e-131A0A445CFJ7_ARAHY; Uncharacterized protein
STRINGGLYMA04G01042.14e-81(Glycine max)