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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Ahy009091 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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| Family | bHLH | ||||||||
| Protein Properties | Length: 315aa MW: 35080.7 Da PI: 4.9781 | ||||||||
| Description | bHLH family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | HLH | 36.8 | 6.8e-12 | 128 | 173 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
h ++Er+RR+++ +++ L l+P + kK++Ka++L A++Y+k+Lq
Ahy009091 128 HIMAERKRREKLSQSLIALAALIPGL-----KKMDKASVLGDAIKYVKELQ 173
999***********************.....9******************9 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| PROSITE profile | PS50888 | 15.135 | 123 | 172 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
| Gene3D | G3DSA:4.10.280.10 | 1.0E-15 | 127 | 185 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
| CDD | cd00083 | 9.32E-12 | 128 | 177 | No hit | No description |
| Pfam | PF00010 | 1.9E-9 | 128 | 173 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
| SuperFamily | SSF47459 | 4.45E-16 | 128 | 186 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
| SMART | SM00353 | 1.9E-13 | 129 | 178 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0046983 | Molecular Function | protein dimerization activity | ||||
| Sequence ? help Back to Top |
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| Protein Sequence Length: 315 aa Download sequence Send to blast |
XCNLKKFLDE DEENQFDEMV MSAVVGEEEE EEEERPTKQL RTCSSSSITN YVSSNSSSSS 60 SPTSQILSFE NSYNPSSQFY GFEFDATPND KVSPQPQVGN NNDKNKLEQT RKPQSQGSKR 120 QAAHSHDHIM AERKRREKLS QSLIALAALI PGLKKMDKAS VLGDAIKYVK ELQGRLKVLE 180 EENKREVESV VIVKNPRFIT SSSDDDSSSC DDDTLEADGE AALAHVEARV AAAEKEVLLR 240 IHCKKQKGIY VKLLSEIQSL HLYVVHSSVL PFGDSVLDIT IVAQMGTEYK LSIRDLVRNL 300 RXGYAENDVV VIAGT |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 131 | 136 | ERKRRE |
| 2 | 132 | 137 | RKRREK |
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_015963747.1 | 0.0 | transcription factor bHLH18 | ||||
| Refseq | XP_025652072.1 | 0.0 | transcription factor bHLH18-like | ||||
| Refseq | XP_025698505.1 | 0.0 | transcription factor bHLH18-like | ||||
| TrEMBL | A0A444ZAU8 | 0.0 | A0A444ZAU8_ARAHY; Uncharacterized protein | ||||
| STRING | GLYMA17G16720.1 | 4e-79 | (Glycine max) | ||||
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT4G37850.1 | 1e-35 | bHLH family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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