PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy009527

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

HSF

Protein Properties

Length: 226aa MW: 26039.1 Da PI: 7.6377

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S58450823	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	109.5	2.5e-34	48	143	2	102
HHHHHHHHHCTGGGTTTSEESSSS....SEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 Flkklyeiledeelkeliswseng....nsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+y++++d+ +++++sw ++g +sfvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgFkkv ++ weF++++F+kg k+ll Ahy009527 48 FLTKTYQLVDDPMTDHIVSWGHDGhstpSSFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFKKVVADR---------WEFANEYFRKGAKHLL 135 9******************998788899***********************************999.........************ PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 ++i+r+k+ Ahy009527 136 CEIHRRKT 143 ****96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.10	2.0E-36	40	136	IPR011991	Winged helix-turn-helix DNA-binding domain
SMART	SM00415	8.7E-55	44	141	IPR000232	Heat shock factor (HSF)-type, DNA-binding
SuperFamily	SSF46785	2.04E-31	45	141	IPR011991	Winged helix-turn-helix DNA-binding domain
PRINTS	PR00056	2.8E-12	48	71	IPR000232	Heat shock factor (HSF)-type, DNA-binding
Pfam	PF00447	3.2E-30	48	141	IPR000232	Heat shock factor (HSF)-type, DNA-binding
PROSITE pattern	PS00434	0	91	115	IPR000232	Heat shock factor (HSF)-type, DNA-binding
PRINTS	PR00056	2.8E-12	103	115	IPR000232	Heat shock factor (HSF)-type, DNA-binding

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 226 aa Download sequence Send to blast
MAFTLEERRS SNIEEEENTN KMKKMMMMMD SSSQKKLPSS SSSVPAPFLT KTYQLVDDPM 60 TDHIVSWGHD GHSTPSSFVV WRPPEFARDL LPNYFKHNNF SSFVRQLNTY GFKKVVADRW 120 EFANEYFRKG AKHLLCEIHR RKTPHHHHHH HHHHQENNNE ALCWIDSSTT PTTIPSIPTS 180 LLLPSPKSPS SSSLGGATNN SDHHQHNHIL AALSEDNQRL KEKELD

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
2ldu_A	1e-21	39	143	12	122	Heat shock factor protein 1
5d5u_B	1e-21	39	143	21	131	Heat shock factor protein 1
5d5v_B	1e-21	39	143	21	131	Heat shock factor protein 1
5d5v_D	1e-21	39	143	21	131	Heat shock factor protein 1
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that specifically binds DNA of heat shock promoter elements (HSE). {ECO:0000269\|PubMed:16202242}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015973391.1	1e-116	heat stress transcription factor B-4b-like
Refseq	XP_015973392.1	1e-116	heat stress transcription factor B-4b-like
Refseq	XP_025608825.1	1e-116	heat stress transcription factor B-4b
Swissprot	Q7XHZ0	6e-61	HFB4B_ORYSJ; Heat stress transcription factor B-4b
TrEMBL	A0A445C442	1e-114	A0A445C442_ARAHY; Uncharacterized protein
STRING	XP_007146140.1	3e-72	(Phaseolus vulgaris)

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]