PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy009592
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 258aa    MW: 28123.5 Da    PI: 4.5873
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58447521PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.63.1e-1859108255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  Ahy009592  59 LYHGVRKRN-WGKWVSEIREPRK---KSRIWLGTFATPEMAARAHDVAALSIKG 108
                69****887.**********843...6***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.40E-3158118No hitNo description
PfamPF008471.7E-1258108IPR001471AP2/ERF domain
SMARTSM003808.1E-3559122IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-2159117IPR016177DNA-binding domain
PROSITE profilePS5103222.72159116IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.8E-3159117IPR001471AP2/ERF domain
PRINTSPR003671.5E-96071IPR001471AP2/ERF domain
PRINTSPR003671.5E-98298IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    Send to blast
XQTTSSSSSS SSSETSTTST ISPPPSPSPS SSSSSSKKQK TEHANKDPKR PRDCSKHPLY  60
HGVRKRNWGK WVSEIREPRK KSRIWLGTFA TPEMAARAHD VAALSIKGQS AILNFPELAG  120
TLPRSVTCSP RDIQAAATAA ASMVKFDSIA AAEQPQHHPD TSDDAETCSQ QQEAEPSSSL  180
SMSRETDSSE LSEIVELPNI EDDEGFDSVE SSRSEFMWFD MVDNCNGWVY DPPMGLEGAE  240
FCANFIADSN SLIPIWDD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-19551161072Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025621491.10.0metabotropic glutamate receptor-like protein P
SwissprotQ9LYD35e-59DREB3_ARATH; Dehydration-responsive element-binding protein 3
TrEMBLA0A445BQ060.0A0A445BQ06_ARAHY; Uncharacterized protein
STRINGGLYMA07G02001.11e-79(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.12e-59ERF family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Galuschka C,Schindler M,Bülow L,Hehl R
    AthaMap web tools for the analysis and identification of co-regulated genes.
    Nucleic Acids Res., 2007. 35(Database issue): p. D857-62
    [PMID:17148485]