PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy009593

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

bHLH

Protein Properties

Length: 165aa MW: 18846.4 Da PI: 9.3197

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-171a-Arachis_hypogaea-18158	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.7	3.3e-16	50	99	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+ E+rRR++iN++f+ Lr+l+P+ ++K + a+ L +++eY+++Lq Ahy009593 50 RSKHSVTEQRRRSKINERFQILRDLIPHG----DQKRDTASFLLEVIEYVQYLQ 99 899***********************7....79****************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	15.809	48	98	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	1.27E-18	49	119	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	4.2E-23	49	120	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.91E-15	50	103	No hit	No description
Pfam	PF00010	1.6E-13	50	99	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	6.3E-12	54	104	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 165 aa Download sequence Send to blast
MRVGKGNQEE EEYDEEEFGS SKKQGPSSAP NNANNTNKDA KAVDKASVIR SKHSVTEQRR 60 RSKINERFQI LRDLIPHGDQ KRDTASFLLE VIEYVQYLQE KVQKYEGSYQ GWGHEPSKLM 120 PWRNSHWRVQ SFVGQPQAIK NGSGPVSPFP GKFDEXNISI SPTMX

Functional Description ? help Back to Top
Source	Description
UniProt	Positive brassinosteroid-signaling protein.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Repressed by heat treatment. {ECO:0000269\|PubMed:12679534}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015965609.1	1e-117	transcription factor BIM2
Refseq	XP_020979810.1	1e-117	transcription factor BIM2
Refseq	XP_025654933.1	1e-117	transcription factor BIM2 isoform X1
Refseq	XP_025700368.1	1e-117	transcription factor BIM2
Swissprot	Q9CAA4	3e-78	BIM2_ARATH; Transcription factor BIM2
TrEMBL	A0A0R0L6J1	3e-95	A0A0R0L6J1_SOYBN; Uncharacterized protein
TrEMBL	A0A445LNY3	8e-95	A0A445LNY3_GLYSO; Transcription factor BIM2 isoform B
TrEMBL	I1JEK7	8e-95	I1JEK7_SOYBN; Uncharacterized protein
STRING	GLYMA02G13670.1	8e-94	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	2e-67	BES1-interacting Myc-like protein 2

Publications ? help Back to Top
Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature. Differentiation, 2010. 80(1): p. 1-8 [PMID:20219281]