PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy009709
Common NameMYB27
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 316aa    MW: 34927.3 Da    PI: 7.0425
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58458619PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-29552PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.71.1e-1260104147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT+ E++++++a +++  + Wk+I + +g  +t  q++s+ qky
        Ahy009709  60 RENWTEPEHDKFLEALQLFDRD-WKKIGAFVG-SKTVIQIRSHAQKY 104
                      789*****************77.*********.*************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.05E-1554110IPR009057Homeodomain-like
PROSITE profilePS5129414.76855109IPR017930Myb domain
TIGRFAMsTIGR015573.0E-1758107IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.601.5E-559100IPR009057Homeodomain-like
SMARTSM007171.1E-1059107IPR001005SANT/Myb domain
PfamPF002493.5E-1060104IPR001005SANT/Myb domain
CDDcd001674.71E-862105No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MVSKNPNPPE GFYLDPTGAA LPGLAPFASV TAAATAVSAP NSVEDAAKKI RKPYTITKSR  60
ENWTEPEHDK FLEALQLFDR DWKKIGAFVG SKTVIQIRSH AQKYFIKVQK SGTSEHLPPP  120
RPKRKAAHPY PQKASKNAPL LSQLSESFQS SSALLESGYV LKHDPSTMLK TPIMNTVVPS  180
WSNSTLQTTN LLHVPKVNDP SGSSESTPRV QPGDESNGQG NSSFPLRVLP DFTQVYSFIG  240
SVFDPNTTDH LHKLKNMDRI DVETVLLLMR NLSVNLTSPD FEDHRKVLST YEVELDTDDY  300
INADILQDDQ LKSAAT
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025702127.10.0protein REVEILLE 6
SwissprotQ8H0W31e-113RVE6_ARATH; Protein REVEILLE 6
TrEMBLV5T7180.0V5T718_ARAHY; Putative MYB-related protein 27
STRINGXP_004516868.11e-176(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.25e-93MYB_related family protein
Publications ? help Back to Top
  1. Chen N, et al.
    Identification of 30 MYB transcription factor genes and analysis of their expression during abiotic stress in peanut (Arachis hypogaea L.).
    Gene, 2014. 533(1): p. 332-45
    [PMID:24013078]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Gray JA,Shalit-Kaneh A,Chu DN,Hsu PY,Harmer SL
    The REVEILLE Clock Genes Inhibit Growth of Juvenile and Adult Plants by Control of Cell Size.
    Plant Physiol., 2017. 173(4): p. 2308-2322
    [PMID:28254761]