PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy009871
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family AP2
Protein Properties Length: 320aa    MW: 35235.5 Da    PI: 9.8519
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59524518PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.52.2e-153190155
        AP2  1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55
               s y+GV++++++gr++A+++d  +   g  ++ ++++lg ++ +e+Aa+a++ a++k++g
  Ahy009871 31 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqaRKgRQVYLGGYDKEEKAARAYDLAALKYWG 90
               57*******************666664478446*************************98 PP
2AP251.52.6e-16133185156
        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                s y+GV++++++grW A+I  +     +k  +lg+f t+eeAa+a++ a+ k++g+
  Ahy009871 133 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRGA 185
                57****************988532...5*************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.4E-123190IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-1731100IPR016177DNA-binding domain
CDDcd000183.41E-2131100No hitNo description
SMARTSM003808.3E-2932104IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.8E-163299IPR001471AP2/ERF domain
PROSITE profilePS5103219.2693298IPR001471AP2/ERF domain
PRINTSPR003674.8E-73344IPR001471AP2/ERF domain
PfamPF008471.4E-10133184IPR001471AP2/ERF domain
CDDcd000181.97E-11133194No hitNo description
SuperFamilySSF541712.55E-18133194IPR016177DNA-binding domain
SMARTSM003802.7E-31134198IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.1E-19134193IPR001471AP2/ERF domain
PROSITE profilePS5103219.164134192IPR001471AP2/ERF domain
PRINTSPR003674.8E-7174194IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
GVAQSSAEKA VVVSDSDSSK KIVDTFGQRT SIYRGVTRHR WTGRYEAHLW DNSCRREGQA  60
RKGRQVYLGG YDKEEKAARA YDLAALKYWG PTATANFPVS NYPKGLEEMK HVTKQEFIAS  120
LRRKSSGFSR GASIYRGVTR HHQQGRWQAR IGRVAGNKDL YLGTFATEEE AAEAYDIAAI  180
KFRGANAVTN FEMSRYDVDA IMKSSLPVGG AAKRLKLSLE SEQKSAINAI TTGQQQQPVC  240
ANMSGSNINF SSTIHQPIAS IPCRIPYDSA PAYYHHNLFH HFHPTNGVET AVTSANAAGL  300
TAPPVAAAAP EFFIWPPQSY
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025651096.10.0AP2-like ethylene-responsive transcription factor AIL6
RefseqXP_025697753.10.0AP2-like ethylene-responsive transcription factor AIL6
SwissprotQ6J9N81e-134AIL7_ARATH; AP2-like ethylene-responsive transcription factor AIL7
TrEMBLA0A444WVW70.0A0A444WVW7_ARAHY; Uncharacterized protein
STRINGXP_007158361.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65510.11e-128AINTEGUMENTA-like 7
Publications ? help Back to Top
  1. Todd J,Post-Beittenmiller D,Jaworski JG
    KCS1 encodes a fatty acid elongase 3-ketoacyl-CoA synthase affecting wax biosynthesis in Arabidopsis thaliana.
    Plant J., 1999. 17(2): p. 119-30
    [PMID:10074711]
  2. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  3. Santuari L, et al.
    The PLETHORA Gene Regulatory Network Guides Growth and Cell Differentiation in Arabidopsis Roots.
    Plant Cell, 2016. 28(12): p. 2937-2951
    [PMID:27920338]
  4. Du Y,Scheres B
    PLETHORA transcription factors orchestrate de novo organ patterning during Arabidopsis lateral root outgrowth.
    Proc. Natl. Acad. Sci. U.S.A., 2017. 114(44): p. 11709-11714
    [PMID:29078398]