![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TF ID | Ahy010017 | ||||||||||||||||
| Organism | |||||||||||||||||
| Taxonomic ID | |||||||||||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
||||||||||||||||
| Family | ERF | ||||||||||||||||
| Protein Properties | Length: 252aa MW: 27596.9 Da PI: 9.8874 | ||||||||||||||||
| Description | ERF family protein | ||||||||||||||||
| Gene Model |
|
||||||||||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 64.5 | 2.2e-20 | 39 | 88 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr ++ +gr++AeIrdp gk+ r++lg+f+taeeAa a++aa+++++g
Ahy010017 39 HYRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAAMAYDAAARQFRG 88
69*******.**********8...557***********************9998 PP
| |||||||
| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| CDD | cd00018 | 2.33E-19 | 39 | 96 | No hit | No description |
| SuperFamily | SSF54171 | 8.5E-23 | 39 | 97 | IPR016177 | DNA-binding domain |
| SMART | SM00380 | 5.5E-39 | 39 | 102 | IPR001471 | AP2/ERF domain |
| Pfam | PF00847 | 3.7E-14 | 39 | 88 | IPR001471 | AP2/ERF domain |
| Gene3D | G3DSA:3.30.730.10 | 8.3E-33 | 39 | 97 | IPR001471 | AP2/ERF domain |
| PROSITE profile | PS51032 | 23.788 | 39 | 96 | IPR001471 | AP2/ERF domain |
| PRINTS | PR00367 | 3.4E-11 | 40 | 51 | IPR001471 | AP2/ERF domain |
| PRINTS | PR00367 | 3.4E-11 | 62 | 78 | IPR001471 | AP2/ERF domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003677 | Molecular Function | DNA binding | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 252 aa Download sequence Send to blast |
MNTPPSMALK EKKKPATKNK INGTVITNDG NNTNNKELHY RGVRKRPWGR YAAEIRDPGK 60 KSRVWLGTFD TAEEAAMAYD AAARQFRGSK AKTNFPLASS SPSPNENANL NINKNNSAGE 120 SPSQSSTVES STPEREVTRR RDVTVIERFP FLPLQQPLPP PHHQLMPFGV AGGTVVDGVV 180 APVRPVFFLD PTVGRAEFFG QSFPVRFEPG PYEIRTGFGS SAQSDSDSSS VVDCQPKREL 240 NLDLNLAPPM DA |
| 3D Structure ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
| 2gcc_A | 1e-23 | 39 | 101 | 5 | 68 | ATERF1 |
| 3gcc_A | 1e-23 | 39 | 101 | 5 | 68 | ATERF1 |
| Search in ModeBase | ||||||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_015953714.1 | 0.0 | ethylene-responsive transcription factor 9 | ||||
| Refseq | XP_025687679.1 | 0.0 | ethylene-responsive transcription factor 9 | ||||
| TrEMBL | A0A445E005 | 0.0 | A0A445E005_ARAHY; Uncharacterized protein | ||||
| STRING | AES89693 | 3e-74 | (Medicago truncatula) | ||||
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G44210.1 | 4e-26 | erf domain protein 9 | ||||




