PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy010166

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

C3H

Protein Properties

Length: 772aa MW: 84886.1 Da PI: 5.4736

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59545995	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	21.8	3.2e-07	324	343	5	25
--SGGGGTS--TTTTT-SS-S CS zf-CCCH 5 lCrffartGtCkyGdrCkFaH 25 +C ffa+ G+C +G++C+F H Ahy010166 324 ICAFFAK-GWCIRGNSCSFLH 343 6****.*********** PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF16131	1.1E-6	303	352	IPR032297	Torus domain
SuperFamily	SSF90229	1.57E-5	320	343	IPR000571	Zinc finger, CCCH-type
PROSITE profile	PS50103	12.831	324	346	IPR000571	Zinc finger, CCCH-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 772 aa Download sequence Send to blast
EEEEEEEEEE EETDGDDKGY ASDSVSDADN DRIDSCQQME SEVQERNLRP ASTMAENPIV 60 MSSPSMPSNE DDHAILKASS PSSEELSFKK EEVHTTREIS SHPKSVNDFA SAEGGKSQVL 120 DSSQQMKSEG LGGDLRPAST VAENPVIKPS PSLCSKEENC VILKACVVSA PSSDTLALKK 180 EQVFPTPKIS NSCHPKSVKD LAPADDGKSQ VLDVDGANTG IVQLTYTVGG CNEPSNDSKA 240 DLGGVKDMDS GATKLSSNIG KDIAIGLPQT DAFVGSANGS QNSLKRNVPL EVESKDDVKQ 300 IKSRTIVPSS NTEMKDGNKH QGIICAFFAK GWCIRGNSCS FLHIKDSAKD TGQETQGDLD 360 KAKQKRELEL EEGTRDNIKR TRTNDQEEIS DWHPCQEKNK YQLRDILFPE SRFTSKYFNT 420 SLSSYSNHAE GLSIAQNHHM YNGYTSAVLS RSPKLSFVTQ KLLNSDKEYN ASRSAFSGSE 480 REELPSVGSS RIPIHSAAYI SKICSYDWEP SVPFRPSFFI TSMNVSSLGD LYDPLRDSIE 540 IPNIGDGSLK ASLLIHGSSI QASSQVLKYG DSAVVGKHMS DFNDEKSSDL PVSSHNRFGE 600 NQPNKNLVPH EKDCHATEME ITSGTCMNYP NGKIGMGKDV TKSDREWTEH DAKHHGEGSA 660 HKKRVDRDKK INDTDADLQT DCSVQKDSKA MRHFRAALVD LVKELLKPSW HEGRLSKDAH 720 ILIVKRSVDK ILSTLEPQQI PTTIDATKQY VSLYRGKIAK MVNGYINKFG KS

Sequence ? help Back to Top

Protein Sequence Length: 772 aa Download sequence Send to blast

EEEEEEEEEE EETDGDDKGY ASDSVSDADN DRIDSCQQME SEVQERNLRP ASTMAENPIV  60
MSSPSMPSNE DDHAILKASS PSSEELSFKK EEVHTTREIS SHPKSVNDFA SAEGGKSQVL  120
DSSQQMKSEG LGGDLRPAST VAENPVIKPS PSLCSKEENC VILKACVVSA PSSDTLALKK  180
EQVFPTPKIS NSCHPKSVKD LAPADDGKSQ VLDVDGANTG IVQLTYTVGG CNEPSNDSKA  240
DLGGVKDMDS GATKLSSNIG KDIAIGLPQT DAFVGSANGS QNSLKRNVPL EVESKDDVKQ  300
IKSRTIVPSS NTEMKDGNKH QGIICAFFAK GWCIRGNSCS FLHIKDSAKD TGQETQGDLD  360
KAKQKRELEL EEGTRDNIKR TRTNDQEEIS DWHPCQEKNK YQLRDILFPE SRFTSKYFNT  420
SLSSYSNHAE GLSIAQNHHM YNGYTSAVLS RSPKLSFVTQ KLLNSDKEYN ASRSAFSGSE  480
REELPSVGSS RIPIHSAAYI SKICSYDWEP SVPFRPSFFI TSMNVSSLGD LYDPLRDSIE  540
IPNIGDGSLK ASLLIHGSSI QASSQVLKYG DSAVVGKHMS DFNDEKSSDL PVSSHNRFGE  600
NQPNKNLVPH EKDCHATEME ITSGTCMNYP NGKIGMGKDV TKSDREWTEH DAKHHGEGSA  660
HKKRVDRDKK INDTDADLQT DCSVQKDSKA MRHFRAALVD LVKELLKPSW HEGRLSKDAH  720
ILIVKRSVDK ILSTLEPQQI PTTIDATKQY VSLYRGKIAK MVNGYINKFG KS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025617950.1	0.0	protein FRIGIDA-ESSENTIAL 1
TrEMBL	A0A445AZS2	0.0	A0A445AZS2_ARAHY; Uncharacterized protein
STRING	XP_004485808.1	0.0	(Cicer arietinum)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33835.1	1e-43	C3H family protein