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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | Ahy010606 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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| Family | bZIP | ||||||||
| Protein Properties | Length: 409aa MW: 43317.6 Da PI: 5.907 | ||||||||
| Description | bZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | bZIP_1 | 68.7 | 9.2e-22 | 304 | 366 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN +L++e+++++ e+++l se+
Ahy010606 304 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVSRIRSEYEQLASEN 366
89**********************************************************998 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Pfam | PF07777 | 2.1E-29 | 1 | 96 | IPR012900 | G-box binding protein, multifunctional mosaic region |
| Pfam | PF16596 | 2.4E-57 | 135 | 271 | No hit | No description |
| Gene3D | G3DSA:1.20.5.170 | 8.4E-18 | 297 | 364 | No hit | No description |
| SMART | SM00338 | 2.1E-22 | 304 | 368 | IPR004827 | Basic-leucine zipper domain |
| Pfam | PF00170 | 4.8E-20 | 304 | 366 | IPR004827 | Basic-leucine zipper domain |
| PROSITE profile | PS50217 | 13.564 | 306 | 369 | IPR004827 | Basic-leucine zipper domain |
| SuperFamily | SSF57959 | 8.75E-11 | 307 | 363 | No hit | No description |
| CDD | cd14702 | 2.94E-23 | 309 | 359 | No hit | No description |
| PROSITE pattern | PS00036 | 0 | 311 | 326 | IPR004827 | Basic-leucine zipper domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 409 aa Download sequence Send to blast |
MGSSEMDKTP KEKESKTPPP ASQEQSSATS TGAVNPEWSS FQAYSPIPPH GFMASSPQAA 60 PYMWGVQHIM PPYGTPTHPY VAMYPHGGIY AHPSMPPGSY PFSPFPMPSP NGIAEASGNT 120 PGSMEADGKP PEVKEKLPIK RSKGSLGSLN MITGKNNEPG KTGTSANGIH SKSGESASEG 180 SSEGSDANSQ NESQLKSGGR QDSYEDEPSQ NGSSAHAPQN GGINTPHAVV NQTMSVIPIT 240 AAGVPGAVPG PTTNLNIGMD YWGTPTASNI PALRGKVPST AVAGGMVAAG SRDSVQSQLW 300 LQDERELKRQ RRKQSNRESA RRSRLRKQAE CDELAQRAEA LKEENASLRS EVSRIRSEYE 360 QLASENAALK ERLGELPGTD DLRSRTMNDQ PAADDPQQSG QAEAVEGGN |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 320 | 326 | RRSRLRK |
| 2 | 320 | 327 | RRSRLRKQ |
| Functional Description ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Description | |||||
| UniProt | Transcriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}. | |||||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_020997574.1 | 0.0 | bZIP transcription factor 16 | ||||
| Refseq | XP_025651256.1 | 0.0 | bZIP transcription factor 16-like isoform X1 | ||||
| Refseq | XP_025651257.1 | 0.0 | bZIP transcription factor 16-like isoform X1 | ||||
| Refseq | XP_025651258.1 | 0.0 | bZIP transcription factor 16-like isoform X1 | ||||
| Refseq | XP_025651259.1 | 0.0 | bZIP transcription factor 16-like isoform X1 | ||||
| Refseq | XP_025651260.1 | 0.0 | bZIP transcription factor 16-like isoform X1 | ||||
| Refseq | XP_025651261.1 | 0.0 | bZIP transcription factor 16-like isoform X1 | ||||
| Refseq | XP_025651262.1 | 0.0 | bZIP transcription factor 16-like isoform X1 | ||||
| Refseq | XP_025651264.1 | 0.0 | bZIP transcription factor 16-like isoform X1 | ||||
| Refseq | XP_025697910.1 | 0.0 | bZIP transcription factor 16-like isoform X1 | ||||
| Refseq | XP_025697911.1 | 0.0 | bZIP transcription factor 16-like isoform X1 | ||||
| Refseq | XP_025697912.1 | 0.0 | bZIP transcription factor 16-like isoform X1 | ||||
| Refseq | XP_025697913.1 | 0.0 | bZIP transcription factor 16-like isoform X1 | ||||
| Refseq | XP_025697914.1 | 0.0 | bZIP transcription factor 16-like isoform X1 | ||||
| Refseq | XP_025697915.1 | 0.0 | bZIP transcription factor 16-like isoform X1 | ||||
| Refseq | XP_025697917.1 | 0.0 | bZIP transcription factor 16-like isoform X1 | ||||
| Refseq | XP_025697918.1 | 0.0 | bZIP transcription factor 16-like isoform X1 | ||||
| Swissprot | Q501B2 | 1e-168 | BZP16_ARATH; bZIP transcription factor 16 | ||||
| TrEMBL | A0A444WVI3 | 0.0 | A0A444WVI3_ARAHY; Uncharacterized protein | ||||
| STRING | GLYMA09G34170.1 | 0.0 | (Glycine max) | ||||
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT2G35530.1 | 1e-141 | basic region/leucine zipper transcription factor 16 | ||||
| Publications ? help Back to Top | |||
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