PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy010755

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

HB-other

Protein Properties

Length: 222aa MW: 24267.4 Da PI: 4.3527

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59523522	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	31	4.4e-10	24	61	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV++WF N R + Ahy010755 24 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 61 665559******************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50071	12.568	2	65	IPR001356	Homeobox domain
SMART	SM00389	1.2E-9	5	69	IPR001356	Homeobox domain
CDD	cd00086	2.50E-13	5	66	No hit	No description
SuperFamily	SSF46689	6.42E-18	6	72	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	1.3E-29	8	71	IPR009057	Homeodomain-like
Pfam	PF05920	7.2E-19	22	61	IPR008422	Homeobox KN domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence Send to blast
EQEAWRPQRG LPERSVNILR AWLFEHFLHP YPSDADKHLL ARQTGLSRNQ VSNWFINARV 60 RLWKPMVEEM YQQEQKEAEE CGAAEEGEEE EEEEQNNSSN GGQQQAQNPS TTSGGESEIQ 120 VEGFSENQEG GSNSIMVAQG GMASEMMPPQ QSQRSMASDD TCRHGSYVAG AEYGTASTTA 180 AAAAADIGSA TLIRFGTTAG DVSLTLGLRH AGNVPRQNPF FS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3k2a_A	6e-18	11	69	5	63	Homeobox protein Meis2
3k2a_B	6e-18	11	69	5	63	Homeobox protein Meis2
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Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that establishes leaf shape by repressing growth in specific subdomains of the leaf. Negatively regulates knox homeobox gene KNAT1/BP expression. {ECO:0000269\|PubMed:17873098}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016199137.2	1e-159	BEL1-like homeodomain protein 2
Refseq	XP_020978640.1	1e-159	BEL1-like homeodomain protein 2
Refseq	XP_020978641.1	1e-159	BEL1-like homeodomain protein 2
Refseq	XP_020978642.1	1e-159	BEL1-like homeodomain protein 2
Refseq	XP_020978643.1	1e-159	BEL1-like homeodomain protein 2
Refseq	XP_025652898.1	1e-158	BEL1-like homeodomain protein 4
Refseq	XP_025652899.1	1e-158	BEL1-like homeodomain protein 4
Refseq	XP_029148678.1	1e-158	BEL1-like homeodomain protein 4
Refseq	XP_029148679.1	1e-158	BEL1-like homeodomain protein 4
Refseq	XP_029148680.1	1e-158	BEL1-like homeodomain protein 4
Swissprot	Q94KL5	6e-53	BLH4_ARATH; BEL1-like homeodomain protein 4
TrEMBL	A0A444WSL3	1e-127	A0A444WSL3_ARAHY; Uncharacterized protein
TrEMBL	A0A444WSP3	1e-127	A0A444WSP3_ARAHY; Uncharacterized protein
STRING	XP_004509227.1	9e-79	(Cicer arietinum)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	4e-47	BEL1-like homeodomain 2

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546]