PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy010859
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 181aa    MW: 19871.2 Da    PI: 5.7748
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S54159182PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.41.1e-072361554
               HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
               riN+ +++Lr+llP+      +K +Ka+ L ++++++k+L
  Ahy010859  2 RINNHLAKLRSLLPNT-----TKTDKASLLAEVIQHVKEL 36
               8**************9.....8****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.03136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.9E-5236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-8249IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.43E-6239No hitNo description
Gene3DG3DSA:4.10.280.104.2E-8247IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2602.8E-472121No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
XRINNHLAKL RSLLPNTTKT DKASLLAEVI QHVKELKRQT SLIAETNPVP TESDELTVDT  60
TDEDGRFVIK ASLCCEDRSD LLPDLIKTLK ELKLRTLKAE ITTLGGRMKN VLFITADEED  120
YSSSNAGSGG GEQSLQLGHY CISSIQEALR AVMEKGGGDE SASGNVKRQR TNINILEQKS  180
L
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015967592.11e-126transcription factor bHLH30-like
RefseqXP_025701803.11e-126transcription factor bHLH30
SwissprotQ9S7Y12e-73BH030_ARATH; Transcription factor bHLH30
TrEMBLA0A445D0031e-125A0A445D003_ARAHY; Uncharacterized protein
STRINGGLYMA01G22530.41e-95(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.13e-66bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Ohashi-Ito K, et al.
    A bHLH complex activates vascular cell division via cytokinin action in root apical meristem.
    Curr. Biol., 2014. 24(17): p. 2053-8
    [PMID:25131670]
  3. Katayama H, et al.
    A Negative Feedback Loop Controlling bHLH Complexes Is Involved in Vascular Cell Division and Differentiation in the Root Apical Meristem.
    Curr. Biol., 2015. 25(23): p. 3144-50
    [PMID:26616019]