PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy010960
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 267aa    MW: 28465.2 Da    PI: 9.0776
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59548494PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.56.5e-10116160554
                HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
        HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                h+++Er RR+ri +++  L+el+P+ +      K + a++L + v+Y+k L
  Ahy010960 116 HSIAERLRRERIAERIRALQELVPSvN------KTDRAAMLDEIVDYVKFL 160
                99***********************55......****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.75E-15109170IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.12111160IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.5E-15113170IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.6E-7116160IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.5E-11117166IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
XAPGPAAPMM LQLNSGDAGP HPLAGGGGFH APMYQLGLSL DQGKGTDGAA AAGVGFLKPP  60
EEASGSGKRF RDDVLDARAK NVFHGQPMPT TIPAAPHPPT MRPRVRARRG QATDPHSIAE  120
RLRRERIAER IRALQELVPS VNKTDRAAML DEIVDYVKFL RLQVKVLSMS RLGGAGAVAP  180
LVTDIPLSSV EEEGSDGGRN RPAWDKWSND GTERQVAKLM EENVGAAMQF LQSKALCIMP  240
ISLASAIYQS QPPDTSSIVK PEANPPP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1120125RLRRER
Functional Description ? help Back to Top
Source Description
UniProtRequired for ovule fertilization. {ECO:0000269|PubMed:15634699}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015969736.10.0transcription factor UNE12
SwissprotO227681e-120UNE12_ARATH; Transcription factor UNE12
TrEMBLA0A445CKF60.0A0A445CKF6_ARAHY; Uncharacterized protein
STRINGGLYMA19G34360.11e-151(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.21e-109bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]