PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy011228

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 528aa MW: 59886.3 Da PI: 6.344

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59522089	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	82.3	8e-26	232	323	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 +fY +YAk vGFsvrk + ++g+ ++r+fvC+++g r++++ +++r +++etrt+C+a+l + +++ +++w+v ++e+ HnHelap Ahy011228 232 DFYVSYAKCVGFSVRKGDVARD-DDGKLIRRRFVCNRQGLRDKKHYMrIDRKRDQKPETRTNCHAMLSIYLDNhTSTWRVRTFEKGHNHELAP 323 6***************9998.8899**********9998775788999*************999**************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	8.7E-24	232	323	IPR004330	FAR1 DNA binding domain
Pfam	PF10551	1.4E-21	443	528	IPR018289	MULE transposase domain

Sequence ? help Back to Top
Protein Sequence Length: 528 aa Download sequence Send to blast
XLFLPSCSWR LHNSASSFSH PLHSPSSILR LRPTSSTKPP DCYPAVDLDA AEGTARHRSV 60 RHRSEQITAG QTAFGQSHWD LLPAGRSLQQ REFVAVNLSR ELHPTDNVVK LIFSCLVVES 120 ICKGTGRRGW KXDGMEHLVD DKSDGMEHLV DDDKGDGVEH VVHDKSDTME HADDDDSDDS 180 SSDSGDDDLQ EDQGKGNDVS HMEEATMFKN KAELSKEEVL KMVFDTHEKA YDFYVSYAKC 240 VGFSVRKGDV ARDDDGKLIR RRFVCNRQGL RDKKHYMRID RKRDQKPETR TNCHAMLSIY 300 LDNHTSTWRV RTFEKGHNHE LAPAGFDYIV PNTRRLTTAK KAQSDGIRIH GFLTFQIMGF 360 MVGQARAFAG VEFSKDLYSY IDKQRCPKIV DGDALAAISY LQGKADSDPT LFARYTTTDD 420 DQLGNLFWAD GLSQVDYEYF GDVVGLDTKY KESMYHRRLV IFSGTNHHRQ TCIFACALLG 480 DERADTYKWA LENFLDAMEK KHPSAVVTDD NEAMREAIQV VFPNATHR

Sequence ? help Back to Top

Protein Sequence Length: 528 aa Download sequence Send to blast

XLFLPSCSWR LHNSASSFSH PLHSPSSILR LRPTSSTKPP DCYPAVDLDA AEGTARHRSV  60
RHRSEQITAG QTAFGQSHWD LLPAGRSLQQ REFVAVNLSR ELHPTDNVVK LIFSCLVVES  120
ICKGTGRRGW KXDGMEHLVD DKSDGMEHLV DDDKGDGVEH VVHDKSDTME HADDDDSDDS  180
SSDSGDDDLQ EDQGKGNDVS HMEEATMFKN KAELSKEEVL KMVFDTHEKA YDFYVSYAKC  240
VGFSVRKGDV ARDDDGKLIR RRFVCNRQGL RDKKHYMRID RKRDQKPETR TNCHAMLSIY  300
LDNHTSTWRV RTFEKGHNHE LAPAGFDYIV PNTRRLTTAK KAQSDGIRIH GFLTFQIMGF  360
MVGQARAFAG VEFSKDLYSY IDKQRCPKIV DGDALAAISY LQGKADSDPT LFARYTTTDD  420
DQLGNLFWAD GLSQVDYEYF GDVVGLDTKY KESMYHRRLV IFSGTNHHRQ TCIFACALLG  480
DERADTYKWA LENFLDAMEK KHPSAVVTDD NEAMREAIQV VFPNATHR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	272	282	KKHYMRIDRKR

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015953307.1	0.0	protein FAR1-RELATED SEQUENCE 5
Refseq	XP_015953308.1	0.0	protein FAR1-RELATED SEQUENCE 5
Refseq	XP_020993395.1	0.0	protein FAR1-RELATED SEQUENCE 5
Refseq	XP_025687375.1	0.0	protein FAR1-RELATED SEQUENCE 5
Refseq	XP_029151959.1	0.0	protein FAR1-RELATED SEQUENCE 5
TrEMBL	A0A445E0Q7	0.0	A0A445E0Q7_ARAHY; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-46	FAR1-related sequence 5