PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy011239
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Trihelix
Protein Properties Length: 292aa    MW: 33459.1 Da    PI: 8.7686
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59554162PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix94.41.1e-2945129187
   trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                rW+++e++aLi++r+em+ ++r+ + k+plWe+vs+k+ e g+ers+k+Ckek+en+ k+++++keg++++  ++ +t+++fdqlea
  Ahy011239  45 RWPREETMALIKIRSEMDGAFRDISPKAPLWEQVSRKLGELGYERSAKKCKEKFENIYKYHRRTKEGRSGK--RNGKTYRFFDQLEA 129
                8********************************************************************96..55567*******85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500907.53838102IPR017877Myb-like domain
SMARTSM007170.001942104IPR001005SANT/Myb domain
PfamPF138373.0E-1944130No hitNo description
Gene3DG3DSA:1.10.10.604.7E-444103IPR009057Homeodomain-like
CDDcd122036.47E-2444109No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MENSTLPENS IENRKVAVAA AEGDSVSSDG LKGEDGERNS SGANRWPREE TMALIKIRSE  60
MDGAFRDISP KAPLWEQVSR KLGELGYERS AKKCKEKFEN IYKYHRRTKE GRSGKRNGKT  120
YRFFDQLEAL DPHPNNNAVI QDAVPCSVRF PVTAMEHSSS ATSSYSSGGG EDEGEGRRRK  180
KKRRLRVFFE GLMREVLEKQ ESLQRKFMEV LDKCDQDRMA REQAWKTEEL ARIKKERELL  240
AQERSIAAAK DEAVMSFIRK FAENSNNNGA LQFPADNNNH LQEQEKEKEK EX
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1175184GRRRKKKRRL
2177182RRKKKR
3177183RRKKKRR
4177184RRKKKRRL
5179183KKKRR
6179184KKKRRL
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that binds specific DNA sequence. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016180760.10.0trihelix transcription factor GT-2
SwissprotQ391174e-44TGT2_ARATH; Trihelix transcription factor GT-2
TrEMBLA0A444X5970.0A0A444X597_ARAHY; Uncharacterized protein
STRINGGLYMA09G19750.21e-104(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76890.25e-46Trihelix family protein