PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy011487
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 205aa    MW: 23108.3 Da    PI: 10.0795
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59554082PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.92.1e-14247555
               HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
               h  +ErrRR+++N++f  Lr+l+P       +K++Ka+iL  ++eY+k+L+
  Ahy011487  2 HVLAERRRREKLNERFIILRSLVPFV-----TKMDKASILGDTIEYVKQLR 47
               7789*********************8.....8*****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088817.428146IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.9E-12246IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-19266IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.33E-13251No hitNo description
SuperFamilySSF474591.05E-19270IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-17352IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
XHVLAERRRR EKLNERFIIL RSLVPFVTKM DKASILGDTI EYVKQLRRKI QDLEAHIRQM  60
EAEQQRSRTP STTIEVHHCG SSNKEQQQHT VVLGHEKRKV RIVEGTKTAT KVAAAAATEA  120
SVQVSIIESD ALLELECSHR EGLLLDVMLV LREMKIEVIG VQSSLNNGVF VAELRAKVKD  180
NNCGKKVSIV EVKRALNQVI PHTGX
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5gnj_A3e-15250957Transcription factor MYC2
5gnj_B3e-15250957Transcription factor MYC2
5gnj_E3e-15250957Transcription factor MYC2
5gnj_F3e-15250957Transcription factor MYC2
5gnj_G3e-15250957Transcription factor MYC2
5gnj_I3e-15250957Transcription factor MYC2
5gnj_M3e-15250957Transcription factor MYC2
5gnj_N3e-15250957Transcription factor MYC2
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1510ERRRRE
2611RRRREK
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator involved in the control of flavonoid pigmentation. {ECO:0000269|PubMed:20949001}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025634327.11e-139basic helix-loop-helix protein A isoform X2
SwissprotE3SXU49e-85BHLHW_PEA; Basic helix-loop-helix protein A
TrEMBLA0A445E6051e-136A0A445E605_ARAHY; Uncharacterized protein
STRINGGLYMA10G03140.26e-88(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09820.19e-46bHLH family protein
Publications ? help Back to Top
  1. Hellens RP, et al.
    Identification of Mendel's white flower character.
    PLoS ONE, 2010. 5(10): p. e13230
    [PMID:20949001]