PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy011733
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NF-YC
Protein Properties Length: 241aa    MW: 27469.6 Da    PI: 10.5716
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58471563PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-12967PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC46.29.9e-15133223999
      NF-YC   9 qiekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 
                + e++ d k h +P+ ri+ i+ka++   ++s ea  ++ ka e f+ +++   ++++ + +r++l    +a +v++   ++fl d vp+ 
  Ahy011733 133 EEEDEGDAKSHVFPMNRIRTIVKAEDPDLRVSQEAIFVVNKAAEKFLEQFAQDGYVRCVQERRKSLSYKHLAHVVSKQRRYEFLSDFVPET 223
                467889*****************98777789*********************************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF471131.05E-1694216IPR009072Histone-fold
PfamPF008081.4E-14145207IPR003958Transcription factor CBF/NF-Y/archaeal histone domain
Gene3DG3DSA:1.10.20.102.0E-22145222IPR009072Histone-fold
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MASNSKTENK TKKKNTKTVT KQNSKTITKS KKENKNKNKK KENVSDNKKN KKRENENANK  60
KNNKKKKKLT HSNGNSKHRG GESLVAPSSS SESQQKREVE SVEQEEEDST VVSNGRTGGK  120
KPKKSKRNRE EVEEEDEGDA KSHVFPMNRI RTIVKAEDPD LRVSQEAIFV VNKAAEKFLE  180
QFAQDGYVRC VQERRKSLSY KHLAHVVSKQ RRYEFLSDFV PETMKAEDAL WERNSGGNGG  240
S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15067KKRENENANKKNNKKKKK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025685515.11e-162ribosomal RNA-processing protein 8 isoform X1
TrEMBLA0A445A9W01e-110A0A445A9W0_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07980.15e-29nuclear factor Y, subunit C10