PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy011896

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

G2-like

Protein Properties

Length: 333aa MW: 38015.8 Da PI: 7.5626

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S58450533	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.4	1.4e-32	22	76	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLH+rF+eav+qLGG+ekAtPk+++++m+++gLtl+h+kSHLQkYRl Ahy011896 22 KPRLKWTPELHQRFIEAVHQLGGAEKATPKSLMRVMGIQGLTLYHLKSHLQKYRL 76 79****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	11.04	19	79	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	2.8E-30	20	77	IPR009057	Homeodomain-like
SuperFamily	SSF46689	4.3E-16	21	77	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	6.0E-23	22	77	IPR006447	Myb domain, plants
Pfam	PF00249	9.8E-10	24	75	IPR001005	SANT/Myb domain
Pfam	PF14379	1.8E-21	119	166	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence Send to blast
MEMDMEKMQN QSVHFVLSTD AKPRLKWTPE LHQRFIEAVH QLGGAEKATP KSLMRVMGIQ 60 GLTLYHLKSH LQKYRLGKSH QLETCSDNQQ EDCRKIKSSH GHCSKENSVG EQKQVTENMK 120 IAQALHMQME VQRKLCEQIE VQKHLQLRIE AQGKYLQSVL KKAQETLQGY NSSSIGLELT 180 KAELSQLVTV INNACPGSPI SELTETRGLS LRSDDERKQD KGTMCSLESS LTSSESCGRK 240 EEIHQPMEEE TRWNLKSFNE ISLEFPFEAF HQTGKGQSGD DSSKEERVRK RNAKTDSEGS 300 YCVEQPSGKR CGNKLRKLEF DLNNQYHNDT DSR

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	6e-20	21	78	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	6e-20	21	78	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	6e-20	22	78	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	6e-20	22	78	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	6e-20	22	78	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	6e-20	22	78	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	6e-20	21	78	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	6e-20	21	78	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	6e-20	21	78	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	6e-20	21	78	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	6e-20	21	78	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	6e-20	21	78	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025700266.1	0.0	myb family transcription factor PHL8
Swissprot	F4I274	6e-69	PHL8_ARATH; Myb family transcription factor PHL8
TrEMBL	A0A445D5F1	0.0	A0A445D5F1_ARAHY; Uncharacterized protein
STRING	GLYMA02G12070.1	1e-148	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69580.1	3e-71	G2-like family protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444]