PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy011902

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

GRAS

Protein Properties

Length: 408aa MW: 45906.6 Da PI: 5.241

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59545588	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	78.6	1.1e-24	140	408	7	270
GRAS 7 ecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIlea 105 ++ ea+++++++la+++L +s+ sp +Rl +y+ A aa + l+ ++ +++ aa+++f++ +P+ kf+h++a +aI e Ahy011902 140 AIGEALENRHKALAEEILRCISNKLSPLSqIVDERLHFYMSLATAANNGD-------YLKGEA-----LKNSDAAFRAFYQGTPFGKFAHFVALSAIIEN 227 45567777777777777777777766666246677777776555444333.......222222.....3344457799********************** PP GRAS 106 vege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg........skeeleetgerLakfAeelgvpfefnvlvakrledleleeL.r 195 + + ++vH++D ++ G+QW+++++a+a R+ ++++T ++s +++ eet++ L + A++ g++++ + k +e+l ++eL + Ahy011902 228 MPPDcDAVHVVDSYMGIGIQWIPMIEAMARRNIT--QFKLTSISSGHHQqghdgnstTPWISEETKRHLYEHARSWGLNLKVEE---KGIEEL-VSELkN 321 9777**********************9755..9**99776677888754444579*************9887...788888.666624 PP GRAS 196 vkp......gEalaVnlvlqlhrlldesvsleserdevLklvksl.....sPkvvvvveqe..adh.nsesFlerflealeyysalfds 270 vk+ +E la n++l+l ++ ++s + e+Lkl k+l + ++++ + + ++ +s +F + f l +y al++s Ahy011902 322 VKKsggsgiKEFLAFNCMLNLPHMANRSSRKQ--AMEFLKLAKDLingsgNKGIITFGDGDafEKLkTSMNFKAFFDGHLVHYHALMES 408 555889999***********95554444..59*****9965555567899998884323357778888888888888888886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50985	19.778	108	408	IPR005202	Transcription factor GRAS
Pfam	PF03514	3.9E-22	140	408	IPR005202	Transcription factor GRAS

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence Send to blast
MMQSNEILQS PSSLFDEPYY YYGLSSMDED GDDYGFSAIF NTCSSENTIF TNEYDHHIQY 60 TIDDETLQLQ PLIHDFPMKF HDLTHQFLES EGSIIPSQEA YSPTQSFNSD MSSSSSTPLN 120 LPQPNTQIEN HLILPHLVDA IGEALENRHK ALAEEILRCI SNKLSPLSQI VDERLHFYMS 180 LATAANNGDY LKGEALKNSD AAFRAFYQGT PFGKFAHFVA LSAIIENMPP DCDAVHVVDS 240 YMGIGIQWIP MIEAMARRNI TQFKLTSISS GHHQQGHDGN STTPWISEET KRHLYEHARS 300 WGLNLKVEEK GIEELVSELK NVKKSGGSGI KEFLAFNCML NLPHMANRSS RKQAMEFLKL 360 AKDLINGSGN KGIITFGDGD AFEKLKTSMN FKAFFDGHLV HYHALMES

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence Send to blast

MMQSNEILQS PSSLFDEPYY YYGLSSMDED GDDYGFSAIF NTCSSENTIF TNEYDHHIQY  60
TIDDETLQLQ PLIHDFPMKF HDLTHQFLES EGSIIPSQEA YSPTQSFNSD MSSSSSTPLN  120
LPQPNTQIEN HLILPHLVDA IGEALENRHK ALAEEILRCI SNKLSPLSQI VDERLHFYMS  180
LATAANNGDY LKGEALKNSD AAFRAFYQGT PFGKFAHFVA LSAIIENMPP DCDAVHVVDS  240
YMGIGIQWIP MIEAMARRNI TQFKLTSISS GHHQQGHDGN STTPWISEET KRHLYEHARS  300
WGLNLKVEEK GIEELVSELK NVKKSGGSGI KEFLAFNCML NLPHMANRSS RKQAMEFLKL  360
AKDLINGSGN KGIITFGDGD AFEKLKTSMN FKAFFDGHLV HYHALMES

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016195899.1	0.0	nodulation-signaling pathway 2 protein
Refseq	XP_025647939.1	0.0	nodulation-signaling pathway 2 protein
TrEMBL	A0A444ZJY3	0.0	A0A444ZJY3_ARAHY; Uncharacterized protein
STRING	GLYMA18G43580.1	1e-119	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08250.1	7e-12	GRAS family protein