PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy011947
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 87aa    MW: 9991.32 Da    PI: 8.4467
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59557046PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.61.2e-071159248
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqkyl 48
                      rWTt   +l+ +a + +  +   +W +Ia  +g g  + ++k r+ ++l
        Ahy011947 11 SRWTTKQNKLFENALAIYDEEttdRWYKIAMFVG-GTNEVEVKRRYEMLL 59
                     59*****************99*************.***********8875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007173.9E-4961IPR001005SANT/Myb domain
SuperFamilySSF466891.95E-111166IPR009057Homeodomain-like
CDDcd001671.71E-51259No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    Send to blast
MASNTLSSPN SRWTTKQNKL FENALAIYDE ETTDRWYKIA MFVGGTNEVE VKRRYEMLLE  60
DIKDIESGKV PLPAYKRNAG CSRVNIS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A9e-2213801178RADIALIS
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015964020.11e-59protein RADIALIS-like 3
RefseqXP_016182643.11e-59protein RADIALIS-like 3
RefseqXP_025653226.11e-59protein RADIALIS-like 3
RefseqXP_025698856.11e-59protein RADIALIS-like 3
SwissprotQ1A1734e-25RADL6_ARATH; Protein RADIALIS-like 6
TrEMBLA0A444Z9Q22e-58A0A444Z9Q2_ARAHY; Uncharacterized protein
STRINGAES949562e-43(Medicago truncatula)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.22e-27RAD-like 6