PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy011992
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family LBD
Protein Properties Length: 207aa    MW: 22423.4 Da    PI: 8.3437
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59558371PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-14732PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26062.79.2e-203742697
     DUF260 26 qpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97
               q +++ +v+k+FG++ ++++++++pe +r+++++sl++eA+ r+ +Pv+Gavg++++++++++q+++e++l+
  Ahy011992  3 QGHATVFVAKFFGRAGLMSFISNVPEAQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLR 74
               678899************************************************************999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5089113.451178IPR004883Lateral organ boundaries, LOB
PfamPF031954.9E-16372IPR004883Lateral organ boundaries, LOB
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
EAQGHATVFV AKFFGRAGLM SFISNVPEAQ RPALFQSLLF EACGRTVNPV NGAVGLLWTG  60
NWHVCQAAVE TVLRGGTLRP SPEFMGMESA GPVVATDEAS EAEVTCGDIW KKVRDPNPSC  120
RFTSSRSTRV AAGAAGKRKR LEEVTRVQTA ADLDLRLTPI FLQKIADYRR RPGSPSMTSE  180
ESVTTTAEIG GDQWGHSGER KVLNLFI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016185912.11e-151LOB domain-containing protein 38
RefseqXP_025627442.11e-151LOB domain-containing protein 38
SwissprotQ9SZE82e-65LBD39_ARATH; LOB domain-containing protein 39
TrEMBLA0A445ESX91e-149A0A445ESX9_ARAHY; Uncharacterized protein
STRINGXP_007155842.13e-99(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37540.12e-65LOB domain-containing protein 39