PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy012057

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

BBR-BPC

Protein Properties

Length: 342aa MW: 38241.6 Da PI: 9.6305

Description

BBR-BPC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59555940	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GAGA_bind	385.6	7.9e-118	1	336	1	298
GAGA_bind 1 mdddgsre..rnkg.yyepa..aslkenl..glqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensla. 92 mdd g+re r+k+ +y+++ + l +++ +q+m+++aerda i+ernlalsekkaa+aerdmaflqrd+a++ern+al+erdn+++al+++ensl+ Ahy012057 1 MDDAGHREngRHKAdQYKSSpgQWLMQHQpsMKQIMALMAERDALIQERNLALSEKKAALAERDMAFLQRDAAITERNNALIERDNAIAALQYRENSLTn 100 9***999*9555544444431145************************************************************9988 PP GAGA_bind 93 ....salpvgvqvlsgtksidslqq.lse..pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesade 185 s++p+g+q+++g k++++ qq +++ ++++d ++ +re++++++lp+++ ++ea +++ r+k+pke+k+ +++kk +k ++kvk++ +d+ Ahy012057 101 ssmpSSCPPGCQISRGIKHMHHPQQqVHHmpNNMGDGSYTAREMHTSDSLPTVTIPSEAGKSR------RGKRPKEPKSVSPNKKASKGTRKVKRDDEDT 194 99999**************9955669999**************998777666544......5568888888888888888888888888774 PP GAGA_bind 186 r.............................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRia 256 + +ka++ks+dl+ln+v++Dest+P+P CsCtG+lrqCYkWGnGGWqSaCCttt+SvyPLP+++++r+aRi+ Ahy012057 195 HkmmfgkanewkssqemingsedlnkqlevTKADWKSQDLALNQVAYDESTMPAPGCSCTGVLRQCYKWGNGGWQSACCTTTLSVYPLPAVPNKRHARIG 294 4588999999************************************************************************************** PP GAGA_bind 257 grKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfv 298 grKmS++af+klL++La+eG+dlsnpvDLkdhWAkHGtn+++ Ahy012057 295 GRKMSGSAFNKLLSRLATEGHDLSNPVDLKDHWAKHGTNRYI 336 ***************************************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM01226	6.1E-161	1	339	IPR010409	GAGA-binding transcriptional activator
Pfam	PF06217	1.9E-99	1	337	IPR010409	GAGA-binding transcriptional activator

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence Send to blast
MDDAGHRENG RHKADQYKSS PGQWLMQHQP SMKQIMALMA ERDALIQERN LALSEKKAAL 60 AERDMAFLQR DAAITERNNA LIERDNAIAA LQYRENSLTN SSMPSSCPPG CQISRGIKHM 120 HHPQQQVHHM PNNMGDGSYT AREMHTSDSL PTVTIPSEAG KSRRGKRPKE PKSVSPNKKA 180 SKGTRKVKRD DEDTHKMMFG KANEWKSSQE MINGSEDLNK QLEVTKADWK SQDLALNQVA 240 YDESTMPAPG CSCTGVLRQC YKWGNGGWQS ACCTTTLSVY PLPAVPNKRH ARIGGRKMSG 300 SAFNKLLSRL ATEGHDLSNP VDLKDHWAKH GTNRYIXDKV DX

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence Send to blast

MDDAGHRENG RHKADQYKSS PGQWLMQHQP SMKQIMALMA ERDALIQERN LALSEKKAAL  60
AERDMAFLQR DAAITERNNA LIERDNAIAA LQYRENSLTN SSMPSSCPPG CQISRGIKHM  120
HHPQQQVHHM PNNMGDGSYT AREMHTSDSL PTVTIPSEAG KSRRGKRPKE PKSVSPNKKA  180
SKGTRKVKRD DEDTHKMMFG KANEWKSSQE MINGSEDLNK QLEVTKADWK SQDLALNQVA  240
YDESTMPAPG CSCTGVLRQC YKWGNGGWQS ACCTTTLSVY PLPAVPNKRH ARIGGRKMSG  300
SAFNKLLSRL ATEGHDLSNP VDLKDHWAKH GTNRYIXDKV DX

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. {ECO:0000269\|PubMed:14731261}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015969865.1	0.0	protein BASIC PENTACYSTEINE6
Refseq	XP_015969866.1	0.0	protein BASIC PENTACYSTEINE6
Refseq	XP_020980171.1	0.0	protein BASIC PENTACYSTEINE6
Refseq	XP_020980172.1	0.0	protein BASIC PENTACYSTEINE6
Refseq	XP_025604874.1	0.0	protein BASIC PENTACYSTEINE6
Refseq	XP_025604875.1	0.0	protein BASIC PENTACYSTEINE6
Refseq	XP_025604876.1	0.0	protein BASIC PENTACYSTEINE6
Refseq	XP_029143325.1	0.0	protein BASIC PENTACYSTEINE6
Refseq	XP_029143326.1	0.0	protein BASIC PENTACYSTEINE6
Swissprot	Q8L999	1e-146	BPC6_ARATH; Protein BASIC PENTACYSTEINE6
TrEMBL	A0A445CJZ6	0.0	A0A445CJZ6_ARAHY; Uncharacterized protein
STRING	GLYMA04G02860.1	0.0	(Glycine max)