PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy012380

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

bHLH

Protein Properties

Length: 337aa MW: 37020.9 Da PI: 6.7957

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59558978	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.1	1.8e-09	142	189	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Ahy012380 142 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 189 8***********************9....677***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	1.11E-9	136	193	No hit	No description
SuperFamily	SSF47459	3.14E-17	136	207	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	5.7E-17	138	206	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	15.663	138	188	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.4E-6	142	189	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.6E-10	144	194	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence Send to blast
XSSPSLKSLG SQMEKICSSP LEMAANSSQE ESTISEQNPN VEGAALKIAS SSDMSSRKRK 60 GSSRAKAKDS TKGGEGSEES NAKRSKGNEG EGNENNGRVK VEEESKGEEK QQQNNKSNNS 120 KPPEPPKDYI HVRARRGQAT DSHSLAERVR REKISERMKL LQDLVPGCNK VTGKALMLDE 180 IINYVQSLQR QVEFLSMKLA SVNTRMDLSI ENIVPKDIFQ SNHSLAHPIF PIDSSATPFY 240 GHQSQQNPVI HNNIPNGSLP HNSVDPLDSA LCQTLGMQLP QLNAFNEIGS QYPLTFCEDD 300 LHTIVQMGFG QTSNRTTPIH SPSFDGSNQV SQMKVEL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016175918.1	0.0	transcription factor bHLH78
Refseq	XP_025618237.1	0.0	transcription factor bHLH78
Refseq	XP_025675988.1	0.0	transcription factor bHLH78
Swissprot	Q9SRT2	6e-74	BH062_ARATH; Transcription factor bHLH62
TrEMBL	A0A444XFC0	0.0	A0A444XFC0_ARAHY; Uncharacterized protein
TrEMBL	A0A445BNA6	0.0	A0A445BNA6_ARAHY; Uncharacterized protein
STRING	XP_007134164.1	1e-161	(Phaseolus vulgaris)
STRING	XP_007140690.1	1e-161	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	7e-72	bHLH family protein

Publications ? help Back to Top
Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature. Differentiation, 2010. 80(1): p. 1-8 [PMID:20219281]