PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy012574

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

NAC

Protein Properties

Length: 246aa MW: 27936.4 Da PI: 8.8641

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59523345	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.6	3.5e-51	16	140	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 lppGfrFhPtdeelvv+yLk+kv + +l++ ++i+evdi+k++PwdLp e+e yfFs+r+ ky++g+r+nrat+sgyWkatg dk++ ++ +++l Ahy012574 16 LPPGFRFHPTDEELVVQYLKRKVFSCPLPA-SFIPEVDICKSDPWDLPGD---LEQERYFFSTREAKYPNGNRSNRATNSGYWKATGLDKHIATSkGHQL 111 79**************************.89***********54...46799******************************99856777 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +g+kktLvfy+g+ p g++tdW+mheyrl Ahy012574 112 IGMKKTLVFYRGKPPYGSRTDWIMHEYRL 140 *************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	8.89E-61	12	160	IPR003441	NAC domain
PROSITE profile	PS51005	57.892	16	160	IPR003441	NAC domain
Pfam	PF02365	1.3E-27	17	140	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence Send to blast
MEGRGSSFVK NGELRLPPGF RFHPTDEELV VQYLKRKVFS CPLPASFIPE VDICKSDPWD 60 LPGDLEQERY FFSTREAKYP NGNRSNRATN SGYWKATGLD KHIATSKGHQ LIGMKKTLVF 120 YRGKPPYGSR TDWIMHEYRL VSHPHLLPMQ NWVLCRIFFK RRAPATAKNV LLDHNSHSAS 180 ASEEAFTISH EGSNSKVVFY DFLAQNRADL NRVTPPASST SGTSGITTES DEHEDSSSCN 240 NFPFFR

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	1e-50	13	161	14	166	NO APICAL MERISTEM PROTEIN
1ut4_B	1e-50	13	161	14	166	NO APICAL MERISTEM PROTEIN
1ut7_A	1e-50	13	161	14	166	NO APICAL MERISTEM PROTEIN
1ut7_B	1e-50	13	161	14	166	NO APICAL MERISTEM PROTEIN
3swm_A	2e-50	13	161	17	169	NAC domain-containing protein 19
3swm_B	2e-50	13	161	17	169	NAC domain-containing protein 19
3swm_C	2e-50	13	161	17	169	NAC domain-containing protein 19
3swm_D	2e-50	13	161	17	169	NAC domain-containing protein 19
3swp_A	2e-50	13	161	17	169	NAC domain-containing protein 19
3swp_B	2e-50	13	161	17	169	NAC domain-containing protein 19
3swp_C	2e-50	13	161	17	169	NAC domain-containing protein 19
3swp_D	2e-50	13	161	17	169	NAC domain-containing protein 19
4dul_A	1e-50	13	161	14	166	NAC domain-containing protein 19
4dul_B	1e-50	13	161	14	166	NAC domain-containing protein 19
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Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional repressor that negatively regulates the expression of genes involved in xylem vessel formation. Represses the transcriptional activation activity of NAC030/VND7, which regulates protoxylem vessel differentiation by promoting immature xylem vessel-specific genes expression (PubMed:20388856). Transcriptional activator that regulates the COLD-REGULATED (COR15A and COR15B) and RESPONSIVE TO DEHYDRATION (LTI78/RD29A and LTI65/RD29B) genes by binding directly to their promoters. Mediates signaling crosstalk between salt stress response and leaf aging process (PubMed:21673078). May play a role in DNA replication of mungbean yellow mosaic virus (PubMed:24442717). {ECO:0000269\|PubMed:20388856, ECO:0000269\|PubMed:21673078, ECO:0000269\|PubMed:24442717}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By abscisic acid (ABA) and salt stress. {ECO:0000269\|PubMed:21673078}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016194832.1	0.0	NAC domain-containing protein 83
Refseq	XP_025650625.1	0.0	NAC domain-containing protein 83-like
Refseq	XP_025697362.1	0.0	NAC domain-containing protein 83-like
Swissprot	Q9FY93	1e-100	NAC83_ARATH; NAC domain-containing protein 83
TrEMBL	A0A445D9S8	0.0	A0A445D9S8_ARAHY; Uncharacterized protein
STRING	cassava4.1_014491m	1e-117	(Manihot esculenta)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	8e-94	NAC domain containing protein 83

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444]