PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy012805

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

NAC

Protein Properties

Length: 250aa MW: 28302.1 Da PI: 9.4939

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S58454406	PU_ref	Unigene	View CDS
PUT-171a-Arachis_hypogaea-22726	PU_unref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	182.8	8.1e-57	17	143	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 lppGfrFhPtdeel+++yL kkv ++++ + ++i evd++++ePwdLp k+k +ekewyfF+ rd+ky+tg r+nrat+sgyWkatgkdke+++ +++lv Ahy012805 17 LPPGFRFHPTDEELITHYLYKKVIDTNFAA-RAIGEVDLNRCEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATESGYWKATGKDKEIFR-GKSLV 114 79***********************999.89***********888999************************************.999 PP NAM 101 glkktLvfykgrapkgektdWvmheyrle 129 g+kktLvfykgrapkgekt+Wvmhe+rle Ahy012805 115 GMKKTLVFYKGRAPKGEKTNWVMHEFRLE 143 **************************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.31E-65	13	167	IPR003441	NAC domain
PROSITE profile	PS51005	59.675	17	167	IPR003441	NAC domain
Pfam	PF02365	1.5E-29	18	142	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence Send to blast
MEKVASLVLK EEEQMDLPPG FRFHPTDEEL ITHYLYKKVI DTNFAARAIG EVDLNRCEPW 60 DLPWKAKMGE KEWYFFCVRD RKYPTGLRTN RATESGYWKA TGKDKEIFRG KSLVGMKKTL 120 VFYKGRAPKG EKTNWVMHEF RLEGKFSIHN LPKTAKNEWV ICRVFRKSSA GKKVHISGIM 180 RLDTFRTELD SSGLPPLTET SPSFDTIHDE SPYVPCFSNP IDVPRNQAAG GSGGGGGVFG 240 GSFPTTPPLX

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	2e-56	14	173	14	171	NO APICAL MERISTEM PROTEIN
1ut4_B	2e-56	14	173	14	171	NO APICAL MERISTEM PROTEIN
1ut7_A	2e-56	14	173	14	171	NO APICAL MERISTEM PROTEIN
1ut7_B	2e-56	14	173	14	171	NO APICAL MERISTEM PROTEIN
3swm_A	2e-56	14	173	17	174	NAC domain-containing protein 19
3swm_B	2e-56	14	173	17	174	NAC domain-containing protein 19
3swm_C	2e-56	14	173	17	174	NAC domain-containing protein 19
3swm_D	2e-56	14	173	17	174	NAC domain-containing protein 19
3swp_A	2e-56	14	173	17	174	NAC domain-containing protein 19
3swp_B	2e-56	14	173	17	174	NAC domain-containing protein 19
3swp_C	2e-56	14	173	17	174	NAC domain-containing protein 19
3swp_D	2e-56	14	173	17	174	NAC domain-containing protein 19
4dul_A	2e-56	14	173	14	171	NAC domain-containing protein 19
4dul_B	2e-56	14	173	14	171	NAC domain-containing protein 19
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the promoter regions of genes involved in chlorophyll catabolic processes, such as NYC1, SGR1, SGR2 and PAO. {ECO:0000269\|PubMed:27021284}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Repressed by the microRNA miR164. {ECO:0000269\|PubMed:15294871, ECO:0000269\|PubMed:17098808}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016192125.1	0.0	NAC domain-containing protein 100
Swissprot	Q9FLJ2	1e-126	NC100_ARATH; NAC domain-containing protein 100
TrEMBL	V7CEG8	1e-142	V7CEG8_PHAVU; Uncharacterized protein
STRING	XP_007155297.1	1e-142	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-128	NAC domain containing protein 100

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546]