PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy013538

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

Trihelix

Protein Properties

Length: 503aa MW: 57104 Da PI: 6.612

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59545343	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	69.2	8.1e-22	180	276	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt.sessstcpyfdql 85 +Wt++ v++Li++++ ++++ + +kk++W+ vsk m ++g+++sp+qC++k+++lnkryk+++++ +++t ++++++ + d++ Ahy013538 180 KWTDNVVQLLIAVVSCVGDDGTINGtdghkrksgvlQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNDILGRGTcCQVVENPTLMDSM 276 7************777766643223445566777********************************************857888888777776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	8.3E-18	178	303	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence Send to blast
LISWSRLRLR FSDSVWFALC STVPLSVVTG HSKISASVLA LYCRKLEIRI PSLELGFGDC 60 VPGMNSSGLG GSFLGGPGGG ILDLEVPFHR HQQQSQMGHP SVTGQHHLNM RTDLENDHPI 120 GLMELKGSNA GVNFGKGKGI ASSNPANSND LSDDDDAEDG NCENFDGGKS KKGSPWQRMK 180 WTDNVVQLLI AVVSCVGDDG TINGTDGHKR KSGVLQKKGK WKTVSKIMIS KGCHVSPQQC 240 EDKFNDLNKR YKRLNDILGR GTCCQVVENP TLMDSMPNLS AKAKDDVRKI LSSKHLFYKE 300 MCAYHNGQRI PNFHDLDLQG YSLDHGRDSR DNNGSEDEAE DNNESDDDDL DNAHGDGERA 360 DEFCDRRKSS EEDFHFWPQS IEMDKFEVEM ARVFQDPTKS VRERREWIKI KMLQLQEQRV 420 SYQVQALELE KQQFKWLRYC SKKDRELERL RLENERMKLE NERRVLKLKQ KEQETDLSRP 480 EMSLDPASLG INRPQGREHF NFS

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence Send to blast

LISWSRLRLR FSDSVWFALC STVPLSVVTG HSKISASVLA LYCRKLEIRI PSLELGFGDC  60
VPGMNSSGLG GSFLGGPGGG ILDLEVPFHR HQQQSQMGHP SVTGQHHLNM RTDLENDHPI  120
GLMELKGSNA GVNFGKGKGI ASSNPANSND LSDDDDAEDG NCENFDGGKS KKGSPWQRMK  180
WTDNVVQLLI AVVSCVGDDG TINGTDGHKR KSGVLQKKGK WKTVSKIMIS KGCHVSPQQC  240
EDKFNDLNKR YKRLNDILGR GTCCQVVENP TLMDSMPNLS AKAKDDVRKI LSSKHLFYKE  300
MCAYHNGQRI PNFHDLDLQG YSLDHGRDSR DNNGSEDEAE DNNESDDDDL DNAHGDGERA  360
DEFCDRRKSS EEDFHFWPQS IEMDKFEVEM ARVFQDPTKS VRERREWIKI KMLQLQEQRV  420
SYQVQALELE KQQFKWLRYC SKKDRELERL RLENERMKLE NERRVLKLKQ KEQETDLSRP  480
EMSLDPASLG INRPQGREHF NFS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016171346.1	0.0	uncharacterized protein LOC107613731
Refseq	XP_016171347.1	0.0	uncharacterized protein LOC107613731
Refseq	XP_025673698.1	0.0	uncharacterized protein LOC112772901
Refseq	XP_025673699.1	0.0	uncharacterized protein LOC112772901
TrEMBL	A0A444Y8C2	0.0	A0A444Y8C2_ARAHY; Uncharacterized protein
STRING	XP_004486956.1	0.0	(Cicer arietinum)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	3e-64	sequence-specific DNA binding transcription factors