PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy013621
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family HD-ZIP
Protein Properties Length: 296aa    MW: 32980.7 Da    PI: 8.1154
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59520461PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.88.7e-19126180256
                T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
   Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                rk+ +++keq  +Lee F++ ++++ ++++ LAk+l+L  rqV vWFqNrRa+ k
  Ahy013621 126 RKKLRLSKEQAAVLEETFKEYNTLNPKQKQALAKQLNLRPRQVEVWFQNRRARTK 180
                788899***********************************************98 PP
2HD-ZIP_I/II125.72.1e-40126215191
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                  +kk+rlskeq+++LEe+F+e ++L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l
    Ahy013621 126 RKKLRLSKEQAAVLEETFKEYNTLNPKQKQALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELR-AL 215
                  69*************************************************************************************9.55 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF046187.6E-23489IPR006712HD-ZIP protein, N-terminal
Gene3DG3DSA:1.10.10.601.5E-18111176IPR009057Homeodomain-like
SuperFamilySSF466897.27E-19112183IPR009057Homeodomain-like
PROSITE profilePS5007117.556122182IPR001356Homeobox domain
SMARTSM003893.6E-15124186IPR001356Homeobox domain
CDDcd000867.16E-14126183No hitNo description
PfamPF000463.3E-16126180IPR001356Homeobox domain
PROSITE patternPS000270157180IPR017970Homeobox, conserved site
PfamPF021832.4E-11182216IPR003106Leucine zipper, homeobox-associated
SMARTSM003405.7E-27182225IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
NNKNEEQEAL KLNLIQKPLP QSFPNHRLSF NNLFPFHDLS SETRSFLRGI DVNSVPTFTA  60
ATAACEDENG VSSPNSTVSS ISGKRSEREP NGNDENEPAE RASYSRGSDE EDGGGIGGDA  120
DGDSSRKKLR LSKEQAAVLE ETFKEYNTLN PKQKQALAKQ LNLRPRQVEV WFQNRRARTK  180
LKQTEVDCEY LKRCCENLTE ENRRLQKEVQ ELRALKLSPQ LYMHMNPPTT LTMCPSCERV  240
AVSSTGSSSS SATMQSAPAS ASQNQMGPNV QRPVPVNPWG AMSLQRRPIE SPTTRP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1124130SRKKLRL
2174182RRARTKLKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016182733.10.0homeobox-leucine zipper protein HAT3 isoform X1
RefseqXP_025632002.10.0homeobox-leucine zipper protein HAT3
SwissprotP466021e-100HAT3_ARATH; Homeobox-leucine zipper protein HAT3
TrEMBLA0A445AD610.0A0A445AD61_ARAHY; Uncharacterized protein
STRINGXP_004515372.11e-128(Cicer arietinum)
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Zou LJ, et al.
    Role of Transcription Factor HAT1 in Modulating Arabidopsis thaliana Response to Cucumber mosaic virus.
    Plant Cell Physiol., 2016. 57(9): p. 1879-89
    [PMID:27328697]
  3. Caggiano MP, et al.
    Cell type boundaries organize plant development.
    Elife, 2018.
    [PMID:28895530]