PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy013828
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family G2-like
Protein Properties Length: 218aa    MW: 24393.1 Da    PI: 10.1635
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58453146PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1023.7e-32147200255
    G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                pr+rWt++LH++Fv+av+ LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  Ahy013828 147 PRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 200
                9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466898.96E-16144201IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.0E-28145201IPR009057Homeodomain-like
TIGRFAMsTIGR015571.1E-23147200IPR006447Myb domain, plants
PfamPF002491.1E-7148199IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    Send to blast
MQTLLASSPP KFQGPDLSLN ISPPCVSVSD SENNNLNNNN NMNMNMNMNM FLSSRKKIVY  60
NDISTSSTTS DSGGSSCGSA SDLSHENNNL LHHQPALTLD LNNYHHHHQG LSRSFNNHHH  120
FQPQIYGREF KRSSRVINGV KRSVRAPRMR WTTTLHAHFV HAVQLLGGHE RATPKSVLEL  180
MNVKDLTLAH VKSHLQMYRT VKSTDKSTGH GQTDMGLX
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A1e-17148202458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B1e-17148202458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A1e-17148202458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C1e-17148202458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D1e-17148202458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F1e-17148202458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H1e-17148202458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J1e-17148202458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that regulates carpel integuments formation. Required for the specification of polarity in the ovule inner integument. Modulates the content of flavonols and proanthocyanidin in seeds. {ECO:0000269|PubMed:16623911, ECO:0000269|PubMed:19054366, ECO:0000269|PubMed:20444210}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025607059.11e-157probable transcription factor KAN4
RefseqXP_025660456.11e-157probable transcription factor KAN4
SwissprotQ9FJV51e-53KAN4_ARATH; Probable transcription factor KAN4
TrEMBLA0A444YWQ68e-84A0A444YWQ6_ARAHY; Uncharacterized protein
STRINGGLYMA17G36500.13e-75(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42630.25e-56G2-like family protein
Publications ? help Back to Top
  1. Lora J,Hormaza JI,Herrero M
    Transition from two to one integument in Prunus species: expression pattern of INNER NO OUTER (INO), ABERRANT TESTA SHAPE (ATS) and ETTIN (ETT).
    New Phytol., 2015. 208(2): p. 584-95
    [PMID:25991552]
  2. Skinner DJ,Brown RH,Kuzoff RK,Gasser CS
    Conservation of the role of INNER NO OUTER in development of unitegmic ovules of the Solanaceae despite a divergence in protein function.
    BMC Plant Biol., 2016. 16(1): p. 143
    [PMID:27350128]
  3. Gomez MD,Ventimilla D,Sacristan R,Perez-Amador MA
    Gibberellins Regulate Ovule Integument Development by Interfering with the Transcription Factor ATS.
    Plant Physiol., 2016. 172(4): p. 2403-2415
    [PMID:27794102]