PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy013842
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C3H
Protein Properties Length: 425aa    MW: 46983.9 Da    PI: 6.9001
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59521853PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH23.87.6e-08260280526
                --SGGGGTS--TTTTT-SS-SS CS
    zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                +C+ f++ G C+ Gd+C +aHg
  Ahy013842 260 PCPEFRK-GSCQKGDSCEYAHG 280
                8******.*************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF484032.32E-1514138IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.205.6E-1616159IPR020683Ankyrin repeat-containing domain
PfamPF127961.7E-838127IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029714.74361141IPR020683Ankyrin repeat-containing domain
SMARTSM002480.0386191IPR002110Ankyrin repeat
CDDcd002043.19E-1261136No hitNo description
PROSITE profilePS5008810.09996131IPR002110Ankyrin repeat
SMARTSM002480.0296128IPR002110Ankyrin repeat
PROSITE profilePS5010313.544255282IPR000571Zinc finger, CCCH-type
SMARTSM003564.0E-5255281IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.106.5E-5260281IPR000571Zinc finger, CCCH-type
PfamPF006422.3E-5260280IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.105.9E-4287319IPR000571Zinc finger, CCCH-type
SMARTSM0035625290313IPR000571Zinc finger, CCCH-type
PROSITE profilePS501037.15290314IPR000571Zinc finger, CCCH-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    Send to blast
MEGELQKQNQ DGVHNFSALL ELSASDDFEA FRREVEEKGC DVNDAGFWYG RRIGSKKMGF  60
EKRTPLMIAS LFGSTRVLKY IIETGMVDVN RACGSDRATA LHCAVAGGSE SSLEIVKLLL  120
DAHADADCVD ASGNKPVNLI APAFNSLSSS RRKAIELFLR GGERDQLFNQ EMEQQMLSSL  180
SLKEGLEKKE GTDKKEYPVD VSLPDINNGV YGTDEFRMYS FKVKPCSRAY SHDWTECPFV  240
HPGENARRRD PRKYPYSCVP CPEFRKGSCQ KGDSCEYAHG VFESWLHPAQ YRTRLCKDET  300
GCSRKVCFFA HKPEELRPVY ASTGSAMPSP KSYSASGLDM TAMSPLSLSS SSLPMPTVST  360
PPMSPLAASS SPKSGSLWAN KINLTPPSLQ LPGSRLKTAL SARDFDMEME LLGLDSPARQ  420
QQQQX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016166023.10.0zinc finger CCCH domain-containing protein 29
RefseqXP_025665500.10.0zinc finger CCCH domain-containing protein 29
SwissprotQ9LUZ41e-177C3H66_ARATH; Zinc finger CCCH domain-containing protein 66
TrEMBLA0A444YDI80.0A0A444YDI8_ARAHY; Uncharacterized protein
STRINGXP_007141759.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58620.11e-163C3H family protein