PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy013885
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 647aa    MW: 70593.7 Da    PI: 6.9889
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59553161PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-21853PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.42.6e-13474520455
                HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                +h e+Er+RR+++N++f  Lr+++P+ +      K++Ka+ L  A+ YI++Lq
  Ahy013885 474 NHVEAERQRREKLNQRFYALRSVVPNiS------KMDKASLLGDAIAYINELQ 520
                799***********************66......******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142151.9E-5334226IPR025610Transcription factor MYC/MYB N-terminal
PROSITE profilePS5088817.301470519IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.45E-15473524No hitNo description
SuperFamilySSF474599.03E-19473535IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.2E-18474532IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.7E-11474520IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.8E-17476525IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 647 aa     Download sequence    Send to blast
XVAAVLGARA LDFLVTNAVS NENLLVAVGS DETLQNKLSD LVDRPNLSNF SWNYAIFWQL  60
SQSKSGDWVL GWGDGSCREP NDAEEGGGGG VRGGILSLRI DDEMQQRMRK RVLQKLHTTF  120
GGSDEDNYAF GLDRVTDTEM FFLASMYFSF PRGHGGPGKC FASGKHLWLS DAMKSNSEYC  180
VRSFLAKNAG FQTIILVPTD LGVLELGSVR TLPENFELLQ AIKSVFSSQA TTTYPMANSK  240
PLMPLTVMSE KRDENNNALF PGLAIGDHTH QNNNKVVEGV PKVFGSAVNS GRSHFREKLA  300
VRKMEERPWV PHHQPNGNNN ANANAINFPN GPPRNGLHHG SAWVGGAAAV GGGNNNNSNC  360
NNHTQGGVRQ AAAGGAAEIF APRSSVSNVS AELANGGVRP QDFRISSYQP QRQVQMQIDF  420
SGATSRPSVR PVVAESELSD VEASCKEEQP SMADERRPRK RGRKPANGRE EPLNHVEAER  480
QRREKLNQRF YALRSVVPNI SKMDKASLLG DAIAYINELQ AKLKMMESER ERHGGSTSFR  540
EPEAMQRAAE NHHGGGNADV DIEAAQDEVI VRVSCPLDSH PVSRVIQTFK EAQINVIDSK  600
LAAANDTIFH TFVIKSQQGC EQLTKDMLIA ALSPESNSLQ QLSSVGG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5gnj_A1e-29468530264Transcription factor MYC2
5gnj_B1e-29468530264Transcription factor MYC2
5gnj_E1e-29468530264Transcription factor MYC2
5gnj_F1e-29468530264Transcription factor MYC2
5gnj_G1e-29468530264Transcription factor MYC2
5gnj_I1e-29468530264Transcription factor MYC2
5gnj_M1e-29468530264Transcription factor MYC2
5gnj_N1e-29468530264Transcription factor MYC2
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1455463RRPRKRGRK
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that negatively regulates jasmonate (JA) signaling (PubMed:30610166). Negatively regulates JA-dependent response to wounding, JA-induced expression of defense genes, JA-dependent responses against herbivorous insects, and JA-dependent resistance against Botrytis cinerea infection (PubMed:30610166). Plays a positive role in resistance against the bacterial pathogen Pseudomonas syringae pv tomato DC3000 (PubMed:30610166). {ECO:0000269|PubMed:30610166}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by wounding, feeding with herbivorous insects, infection with the fungal pathogen Botrytis cinerea and infection with the bacterial pathogen Pseudomonas syringae pv tomato DC3000. {ECO:0000269|PubMed:30610166}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016205249.10.0transcription factor bHLH13
RefseqXP_025662938.10.0transcription factor bHLH13
SwissprotA0A3Q7ELQ20.0MTB1_SOLLC; Transcription factor MTB1
TrEMBLA0A444YLG20.0A0A444YLG2_ARAHY; Uncharacterized protein
STRINGGLYMA19G44570.20.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01260.31e-109bHLH family protein
Publications ? help Back to Top
  1. Tomato Genome Consortium
    The tomato genome sequence provides insights into fleshy fruit evolution.
    Nature, 2012. 485(7400): p. 635-41
    [PMID:22660326]
  2. Sun H,Fan HJ,Ling HQ
    Genome-wide identification and characterization of the bHLH gene family in tomato.
    BMC Genomics, 2015. 16: p. 9
    [PMID:25612924]
  3. Liu Y, et al.
    MYC2 Regulates the Termination of Jasmonate Signaling via an Autoregulatory Negative Feedback Loop.
    Plant Cell, 2019. 31(1): p. 106-127
    [PMID:30610166]