PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy014038
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 755aa    MW: 86543.8 Da    PI: 8.4906
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59521594PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1781.7e-2437128191
       FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                +fY++Y++  GF +r+ k+ ++ +ng i+++t+ C++eg+r+++  + + ++r+++++tr+gC a++++k++   gkw+v++++ +HnHel p
  Ahy014038  37 RFYEQYSRGKGFAMRVGKKLRN-KNGDIVRYTYLCNREGFRQKKWVElEGRKREHKVVTRCGCMAEMHIKQNGqMGKWYVSRFVDDHNHELLP 128
                5*****************9999.7777****************9888678889999***************9989***************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.1E-2237128IPR004330FAR1 DNA binding domain
PfamPF105519.8E-33248342IPR018289MULE transposase domain
PROSITE profilePS5096610.064528561IPR007527Zinc finger, SWIM-type
PfamPF044342.0E-5535557IPR007527Zinc finger, SWIM-type
SMARTSM005750.0012536563IPR006564Zinc finger, PMZ-type
SuperFamilySSF577568.89E-5675705IPR001878Zinc finger, CCHC-type
PROSITE profilePS501588.598684701IPR001878Zinc finger, CCHC-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 755 aa     Download sequence    Send to blast
EYLDGDGDLG NNVRDSGLTR PEEVMEMLFN SPDEAARFYE QYSRGKGFAM RVGKKLRNKN  60
GDIVRYTYLC NREGFRQKKW VELEGRKREH KVVTRCGCMA EMHIKQNGQM GKWYVSRFVD  120
DHNHELLPPK LVEYLPPHRK MSDVDVAHMD SLRQVGISVP KIYESLAAQA GGFDHIPFFT  180
KRDMYNEVRR QRGMRKGDVN ATIRYFEAGA KADEKLFWRC QVSADQHMCD LFWCDGRSQD  240
DYKIFGDVLA FDATYGRNKY NLPVIIFSGV NHHNQTCVFG AAMVSCETQA TYVWVLQKLL  300
ECMEGKAPKA VITDGDRSMR MAINEVFPEA HHRLCAWHLL KNATTNVCLP RFTTLFRYCM  360
LADIEIEEFE QHWEAMLDEC GVRDVEWVQD TYRNKLYWAT AYIRGRFFAG IRTTSRCESL  420
HAKLGRFVER RYGILNFVTN FQRCVEFLRD NEDEMDFRSS YGTPVLQTQF PELEKSGAMK  480
YTREIFSRFR ESLKRCVRIT VVESQPCEGS TIYVTQKYMR PGRKWNVMHV LASDKYTCSC  540
QRMESFGLPC VHILSVLVRL DVGSLPDTLV LERWTKSAKF GLYDDIAGDK MVDIAALYRM  600
RMETFLQHCK RLARLICNND DLFKLYTEQI VQEATNLESM NDSGNSVGVG GGGNNGRVLD  660
PIGVRTKGTG RGNVQVGARG VKRRKCSTCG VVGHRRTQCP NRANMSVPNS QYEVPQMVSQ  720
SAARAEFPPV KNIGVQDCYR PSAADTSDFR AAVGG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1490495ESLKRC
2678683RGVKRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025640656.10.0protein FAR1-RELATED SEQUENCE 5
TrEMBLA0A445EHC20.0A0A445EHC2_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-101FAR1-related sequence 5